The D614G Research Group Week 12

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Preparing for the Final Research Project

The Research Question

Does the D614G mutation always accompany the three other mutations (C3037T, C14408T, A23403G) as indicated by Korber et al. 2020?

Necessary Data

10-15 sequences that include the G614 mutation. To be collected from GISAID or NCBI SARS-CoV-2 Data Hub

Tools

Acknowledgements

Owen R. Dailey (talk) 11:48, 3 December 2020 (PST) Ian R. Wright (talk) 11:49, 3 December 2020 (PST) Kam Taghizadeh (talk) 11:58, 3 December 2020 (PST)

References

  • OpenWetWare. (2020). BIOL368/F20:Week 12. Retrieved 3 December 2020, from https://openwetware.org/wiki/BIOL368/F20:Week_12
  • Korber, B., Fischer, W. M., Gnanakaran, S., Yoon, H., Theiler, J., Abfalterer, W., ... & Hastie, K. M. (2020). Tracking changes in SARS-CoV-2 Spike: evidence that D614G increases infectivity of the COVID-19 virus. Cell, 182(4), 812-827.


Template

Owen R. Dailey Template

User Page

Owen R. Dailey

Assignments

Week 1 Assignment

Week 2 Assignment

Week 3 Assignment

Week 4 Assignment

Week 5 Assignment

Week 6 Assignment

Week 7 Assignment

Week 8 Assignment

Week 9 Assignment

Week 10 Assignment

Week 11 Assignment

Week 12 Assignment

Week 14 Assignment

Individual Journals

Owen R. Dailey Week 2

Owen R. Dailey Week 3

Owen R. Dailey Week 4

Owen R. Dailey Week 5

Owen R. Dailey Week 6

Owen R. Dailey Week 7

BacFITBase Review

Owen R. Dailey Week 9

Owen R. Dailey Week 10

Owen R. Dailey Week 11

The D614G Research Group Week 12

Owen R. Dailey Week 13

The D614G Research Group Week 14

Owen R. Dailey Week 15

Class Journals

Week 1 Class Journal

Week 2 Class Journal

Week 3 Class Journal

Week 4 Class Journal

Week 5 Class Journal

Week 6 Class Journal

Week 7 Class Journal

Week 8 Class Journal

Week 9 Class Journal

Week 10 Class Journal

Week 11 Class Journal

Week 12 Class Journal

Week 14 Class Journal

Week 15 Class Journal

Week 16 Class Journal,


Nathan R. Beshai User Page

Nathan R. Beshai Template Page

Nathan R. Beshai

Course assignments

  1. Week 1
  2. Week 2
  3. Week 3
  4. Week 4
  5. Week 5
  6. Week 6
  7. Week 7
  8. Week 8
  9. Week 9
  10. Week 10
  11. Week 11
  12. Week 12
  13. Week 14

Individual journal assignments

  1. Nathan R Beshai Week 2
  2. Nathan R Beshai Week 3
  3. Nathan R Beshai Week 4
  4. Nathan R Beshai Week 5
  5. Nathan R Beshai Week 6
  6. Nathan R Beshai Week 7
  7. Nathan R Beshai Week 8
  8. Nathan R Beshai Week 9
  9. Nathan R Beshai Week 10
  10. Nathan R Beshai Week 11
  11. The D614G Research Group Week 12
  12. The D614G Research Group Week 14

Class Journals

  1. Class Journal 1
  2. Class Journal 2
  3. Class Journal 3
  4. Class Journal 4
  5. Class Journal 5
  6. Class Journal 6
  7. Class Journal 7
  8. Class Journal 8
  9. Class Journal 9
  10. Class Journal 10
  11. Class Journal 11
  12. Class Journal 12
  13. Class Journal 14

Link to Brightspace and LMU's Homepage

  1. Link to Brightspace
  2. Link to LMU's Homepage,

user:Kam Taghizadeh

Template: Kam Taghizadeh

Links to Weekly Assignments

Links to Individual Journal Assignments

Links to Shared Journal Assignments

Ian Wright's Bioinformatics Portfolio

Ian R. Wright's User Page

Ian Wright's Template

Assignment Pages

BIOL368/F20:Week 1

BIOL368/F20:Week 2

BIOL368/F20:Week 3

BIOL368/F20:Week 4

BIOL368/F20:Week 5

BIOL368/F20:Week 6

BIOL368/F20:Week 8

BIOL368/F20:Week 9

BIOL368/F20:Week 10

BIOL368/F20:Week 11

BIOL368/F20:Week 12

BIOL368/F20:Week 14

Individual Journal Entries

  1. Ian R. Wright Week 1
  2. Ian R. Wright Week 2
  3. Ian R. Wright Week 3
  4. Ian R. Wright Week 4
  5. Ian R. Wright Week 5
  6. Ian R. Wright Week 6
  7. Ian R. Wright Week 7
  8. Therapeutic Target Database (TTD) Review
  9. Ian R. Wright Week 9
  10. Ian R. Wright Week 10
  11. Ian R. Wright Week 11
  12. The D614G Research Group Week 12
  13. Ian R. Wright Week 14
  14. The D614G Research Group Week 14

Class Journals

BIOL368/F20:Class_Journal_Week_1

BIOL368/F20:Class_Journal_Week_2

BIOL368/F20:Class_Journal_Week_3

BIOL368/F20:Class_Journal_Week_4

BIOL368/F20:Class_Journal_Week_5

BIOL368/F20:Class_Journal_Week_6

BIOL368/F20:Class_Journal_Week_7

BIOL368/F20:Class_Journal_Week_8

BIOL368/F20:Class_Journal_Week_9

BIOL368/F20:Class_Journal_Week_10

BIOL368/F20:Class_Journal_Week_11

BIOL368/F20:Class_Journal_Week_12

BIOL368/F20:Class_Journal_Week_14

Nathan R. Beshai (talk) 11:51, 3 December 2020 (PST)

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