Mia Huddleston Week 5

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Electronic Lab Notebook

See Week 5 Annotated Bibliography for this week's assignment.

Research Project Outline

The basic processes that Anu and I will be using to complete our research project:

  • Goal: To create a correlation rather than three groupings of analysis between CD4 T cell counts and genetic diversity
  • S and theta values will be calculated for each visit for each subject and compared with their CD4 T cell count of that visit
    • We will team up with Will Fuchs and Colin Wikholm in order to calculate all of these as they will need the same data for their project.
    • A graph can also be calculated using these numbers vs. each visit
  • Graphs will also be created comparing S and theta values versus CD4 T cell counts
  • A few phylogenic trees will be created as well
  • Then, we will use a regression curve to find the answer to our hypothesis



This work was done with help from my homework partner, Anu in class and with the help of our professor; Dr. Dahlquist. Anu and I met in class to determine the outline of our research project. While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source. Mia Huddleston 16:50, 3 October 2016 (EDT)

Useful links

User Page: Mia Huddleston

Bioinfomatics Lab: Fall 2016

Class Page: Bioinfomatics Laboratory, Fall 2016

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