Xenopus Community
From OpenWetWare
Jump to navigationJump to search
XenCommunity
Under Construction. Edits and suggestions welcome.
- See Synthetic Biology Community Pages for ideas.
- Edit help for this section or to make your own lab wiki
- Editing is easy with wiki edit instructions.
- It was a wonderful meeting in Japan, especially the meeting summary given by Jerry.
Discussion about having XenWiki on OWW or hosted at [XenBase]
- XenBase could set up and host a wiki for the Xen Community on its new server, or the XenWiki could be here on OWW. I justed added a few thoughts.
Advantages to hosting XenWiki on OWW
- Broader involvement with the non-Xenopus scientific community
- Xen Labs will learn about other work going on in OWW labs, esp. Synthetic Biology
- OWW has a lab-tweaked mediawiki
- very interactive scientists with many interests are managing the OWW site
- learning curve for wikitricks (editing, etc) is very good because of all the help and organization on OWW. This will help new XenLabs get wikified.
- don't have to cope with administrative and technical overhead of setting up/maintaining the software and hardware to run the wiki
- backed up every day -> moving to server with redundant hardware, diesel power backup, multiple server uplinks to internet, 1 hr hardware replacement guarantee, 24hr monitoring... et cetera
- it does not hurt to try, and then move your wiki later. As long as you are using mediawiki (by far the largest wiki distribution), you can always move pages later. It really is just copying and pasting code. In fact, we could probably export the whole lot for you.
Advantages to hosting XenWiki through the [XenBase] server
- direct links possible between Xenwiki and XenBase areas
- this is possible (and probably easier) on OWW as we have experience with other databases (BioBricks), and could probably easily modify it to contain your information.
- control
- private spaces -> one could implement a scheme (not technically possible yet, but could be programmed in) where individual pages have different rights. Essentially, giving users the ability to place read/write controls on data.
What should be on this wiki vs what is already on JGI and XenBase
Discuss and decide what we need so we can ask NIH, get involved with NIH "report" recommendations
- notes from 11th Xen Meeting: Instructions for submitting a proposal NHGRC: see 'white paper' instructions on web site (need the link)
- program announcement due Jan 18 2007, document on web site but applications that do the best produce a resource for the community and also do good science, US labs and non-US labs are considered.
Next Meeting
- will be in Germany, details TBA
- contact committee for ideas for next meeting
Collected from Bruce Blumberg's excellent Xine
- Xine in html format, back issues
Links to useful sources of information for Xenopus (in no particular order) general interest and utility
- Trans NIH Xenopus initiative
- Harland lab X. tropicalis site
- Grainger lab X. tropicalis site
- Amy Sater's X. tropicalis genetic map site
- Information on the X. tropicalis listserver
- Peter Vize's Xenopus über database
- Zimmerman Lab X. tropicalis website, database of mutants
- metazome
Genomic resources
- XDB at NIBB - Naoto Ueno's X. laevis EST database
- Xenopus gene collection
- full length collection at the Gurdon Institute
- JGI X. tropicalis genome site with browser and other info
- AXELDB - Christof Niehrs' Xenopus database
- Xenbase
Other
- The Frog Store Isn't the internet wonderful?
<wikionly>
Recent changes
List of abbreviations:
- N
- This edit created a new page (also see list of new pages)
- m
- This is a minor edit
- b
- This edit was performed by a bot
- (±123)
- The page size changed by this number of bytes
3 August 2021
| 23:04 | Lee:Publications diffhist +20 Wooin Lee talk contribs →2021 | ||||
| 20:03 | Hu:Members diffhist +65 Hugangqing talk contribs | ||||
|
|
13:17 | (User creation log) [Yar (2×)] | |||
|
|
13:17 User account Xiangzhang talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
13:15 User account Kwon35 talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
10:14 | Chenlab:Lab Members 7 changes history +103 [Kaifu Chen (7×)] | |||
|
|
10:14 (cur | prev) 0 Kaifu Chen talk contribs | ||||
|
|
09:03 (cur | prev) -5 Kaifu Chen talk contribs | ||||
|
|
09:02 (cur | prev) -9 Kaifu Chen talk contribs | ||||
|
|
08:59 (cur | prev) +65 Kaifu Chen talk contribs | ||||
|
|
08:57 (cur | prev) +20 Kaifu Chen talk contribs | ||||
|
|
08:56 (cur | prev) +30 Kaifu Chen talk contribs | ||||
|
|
08:54 (cur | prev) +2 Kaifu Chen talk contribs | ||||
2 August 2021
| 21:02 | CHIP:Talks diffhist 0 Gabor Balazsi talk contribs | ||||
| m 15:21 | Griffin:Trending diffhist +43 Korey Griffin talk contribs →Chalkboard | ||||
| 08:38 | Chenlab:Lab Members diffhist -2 Kaifu Chen talk contribs | ||||
| N 07:06 | RAVE:Tutorial Outline diffhist +2,901 John Magnotti talk contribs Created page with "Flow for analysis 1. Get the raw data imported A. Directory tree i. iEEG data ii. Freesurfer data iii. Others B. File format C. Collect necessary parameters (sampli..." | ||||
| 07:05 | RAVE:ravetutorials diffhist +79 John Magnotti talk contribs | ||||
31 July 2021
| N 19:04 | User:Trigimp diffhist +287 Trigimp talk contribs Introduction | ||||
|
|
15:50 | (User creation log) [Yar (18×)] | |||
|
|
15:50 User account Erdent talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:50 User account Ahmadalaydi talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:50 User account Harbova talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:50 User account Hong10 talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:49 User account Gotutop talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:47 User account Mlukarska talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:47 User account Trigimp talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:46 User account Alexwong2021 talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:46 User account Liisa van Vliet talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:46 User account Karolina Stojowska-Swędrzyńska talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:46 User account Technos12 talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:45 User account Wesley01 talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:44 User account Tylorkeller talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:44 User account Kconklin talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:44 User account Youngsim21 talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:43 User account BleAuct talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:43 User account Rita talk contribs was created by Yar talk contribs and password was sent by email | ||||
|
|
15:42 User account Lijianathome talk contribs was created by Yar talk contribs and password was sent by email | ||||
30 July 2021
| 23:11 | User:Gareth Trubl diffhist +13 Gtrubl talk contribs →Teaching, outreach, & other experiences | ||||
29 July 2021
| 21:57 | CHIP:Talks diffhist +1 Gabor Balazsi talk contribs | ||||
|
|
m 15:49 | Griffin:Trending 2 changes history +422 [Korey Griffin (2×)] | |||
| m |
|
15:49 (cur | prev) -2 Korey Griffin talk contribs →Chalkboard | |||
| m |
|
15:49 (cur | prev) +424 Korey Griffin talk contribs →Chalkboard | |||
28 July 2021
|
|
m 14:33 | Ernesto-Perez-Rueda:Publications 2 changes history +407 [Ernesto Perez-Rueda (2×)] | |||
| m |
|
14:33 (cur | prev) 0 Ernesto Perez-Rueda talk contribs | |||
| m |
|
14:32 (cur | prev) +407 Ernesto Perez-Rueda talk contribs | |||
|
|
13:50 | User:Gareth Trubl 3 changes history +1,010 [Gtrubl (3×)] | |||
|
|
13:50 (cur | prev) +157 Gtrubl talk contribs →Teaching, outreach, & other experiences | ||||
|
|
13:49 (cur | prev) +680 Gtrubl talk contribs →Teaching, outreach, & other experiences | ||||
|
|
12:22 (cur | prev) +173 Gtrubl talk contribs →About me & research interests | ||||
|
|
m 12:44 | User:Korey Griffin 4 changes history -19 [Korey Griffin (4×)] | |||
| m |
|
12:44 (cur | prev) +11 Korey Griffin talk contribs →Protein | |||
| m |
|
12:44 (cur | prev) +11 Korey Griffin talk contribs →Gene | |||
| m |
|
12:43 (cur | prev) -22 Korey Griffin talk contribs →Empirical | |||
| m |
|
12:43 (cur | prev) -19 Korey Griffin talk contribs →Empirical | |||
| 12:28 | CAMRI:COVID diffhist +273 Lacey Berry talk contribs →NEW UPDATES!! | ||||
| 12:23 | CAMRI:Training diffhist +6 Lacey Berry talk contribs →CAMRI USER TRAINING INFORMATION | ||||
</wikionly>