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- 07:10, 9 September 2023 RAVE:VScode (hist | edit) [6,721 bytes] Zhengjia (talk | contribs) (Created page with "{{RAVE_Navigation_Bar}} =Using RAVE on the SSH with VSCode on remote server= When running RAVE on a remote server such as school HPC, users often encounter the following issues: * Server does not have or users have to compete for remote desktop resources (e.g. VPN, RDP) * Server does not expose its IP address (Cannot access to RAVE sessions remotely) We recommend using vscode in this case. ==Prerequisite== On the server, [https://code.visualstudio.com/docs/remote/t...")
- 13:45, 20 August 2023 McClean: Laboratory Cabinet Maint (hist | edit) [6,710 bytes] Megan N McClean (talk | contribs) (Created page with "<!-- COPY EVERYTHING BELOW HERE TO START YOUR OWN PROTOCOL! --> ==Overview== This page lists useful tips for maintaining the laboratory cabinets in Engineering Centers Building. Specifically the original wooden laboratory furniture. So the roller drum has stopped doing what it does so well---that is, roll around a bunch of tubes. Why oh why is this happening? First thing to check (thanks to the all-knowing Dr. Silverman for letting me in on this) is if the motor br...")
- 06:55, 7 August 2023 Tomlinson:JCSchedule (hist | edit) [1,012 bytes] Ryan E. Tomlinson (talk | contribs) (Created page with "{{Tomlinson}} '''TFC Joint Lab Meeting Schedule''' Wednesday at 3:30 PM {| class="wikitable" |- ! Date ! Speaker ! Lab ! Location |- | 5/17/23 | Amanda | Freeman | College 707 |- | 5/31/23 | Sam Rajpar | Tomlinson | College 707 |- | 6/14/23 | Carly Smith | Freeman | College 707 |- | 6/28/23 | Pam Walters | Office for Professional Writing | College 707 |- | 7/12/23 | Promotion! | Freeman & Tomlinson | Top Tomato |- | 7/26/23 | Abu | Collins | College 707 |- | 8/9/23 |...")
- 13:38, 26 July 2023 Vogel (hist | edit) [12 bytes] Vogellab (talk | contribs) (Created page with "frameless|upright=2.5 <div style="padding: 10px; color: #ffffff; background-color: #004aad; width: 730px"> <center> [https://vogellab.com/ <font face="trebuchet ms" style="color:#ffffff"> '''Lab website''' </font>] <font face="trebuchet ms" style="color:#ffffff"> '''Contact''' </font> Vogel:Back Door | <font face="trebuchet ms" style="color:#ffff...")
- 13:32, 26 July 2023 Vogel:Contact (hist | edit) [12 bytes] Vogellab (talk | contribs) (Created page with " <h3>Contact Us</h3> McGill University, Bellini Pavilion<br> 3649 Promenade Sir William Osler<br> Student Office #234/ PI office #269<br> Montreal, Quebec, H2T 2N9<br> Canada<br> Jackie.vogel@mcgill.ca<br> </div>")
- 03:04, 24 July 2023 DropBase:Anchored droplet (hist | edit) [526 bytes] FabriceG (talk | contribs) (Created page with "{{DropBase}} Category:Protocol Category:Microfluidics <div ...> =Overview= 180px|left '''Description''' Anchored droplet array with pillars embedding air cavities '''Reference''' Nikolic, N., Anagnostidis, V., Tiwari, A., Chait, R. & Gielen, F. Investigating bacteria-phage interaction dynamics using droplet-based technology. BioRxiv, doi:10.1101/2023.07.14.549014 (2023) <br> <br>")
- 07:33, 12 July 2023 YAEL:Launching (hist | edit) [250 bytes] Michael S Beauchamp (talk | contribs) (Created page with "{{YAEL_Navigation_Bar}} __NOTOC__ ==Launching YAEL== Open R (or RStudio) and enter the following command into the console: yael::start_yael() A new web browser window should open with the RAVE splash screen. YAEL is developed and tested using Google Chrome; some features, such as recording videos and loading volumetric MRIs, may not work in other browsers.")
- 07:31, 12 July 2023 YAEL:Help (hist | edit) [2,976 bytes] Michael S Beauchamp (talk | contribs) (Created page with "{{YAEL_Navigation_Bar}} Personalized support is provided via a dedicated yael_support channel in the RAVE Slack workspace <i>rave-brain.slack.com</i>. E-mail slack@rave.wiki for an invitation to the support channel. <b>Browser disconnected from server</b>. Another common issue is that the RAVE GUI in the browser window appears dim or grayed out. This indicates that the browser has become disconnected from the RAVE server (e.g. if the computer has gone to sleep mode...")
- 07:30, 12 July 2023 RAVE:Help (hist | edit) [4,360 bytes] Michael S Beauchamp (talk | contribs) (Created page with "{{RAVE_Navigation_Bar}} ==Typical workflow== RAVE's file locations (directories for Raw and Processed data) can be set/viewed using RAVE options (type into the RStudio console): rave::rave_options() If you are not using the included sample data, preprocess your own data (includes electrode localization): Preprocessing. Analysis of data usually begins with single-subject analysis in the Power Explorer module....")
- 07:29, 12 July 2023 RAVE:help (hist | edit) [4,360 bytes] Michael S Beauchamp (talk | contribs) (Created page with "{{RAVE_Navigation_Bar}} ==Typical workflow== RAVE's file locations (directories for Raw and Processed data) can be set/viewed using RAVE options (type into the RStudio console): rave::rave_options() If you are not using the included sample data, preprocess your own data (includes electrode localization): Preprocessing. Analysis of data usually begins with single-subject analysis in the Power Explorer module....")
- 07:24, 12 July 2023 YAEL:Community (hist | edit) [1,004 bytes] Michael S Beauchamp (talk | contribs) (Created page with "{{YAEL_Navigation_Bar}} ==YAEL Development Team== none| 400 px | Rave Development Team Left to right: Michael Beauchamp, Ph.D., Zhengjia Wang, Ph.D., Xiang Zhang, M.S., John Magnotti, Ph.D. in Richards Building 6A. 250px|UPenn logo == Workshops == <b>Oct 18, 2022</b> UAB Medical School. University of Alabama at Birmingham. Birmingham, AL Hosted by: Dr. Adam Goodman and Dr. Lynn Dobrunz (UAB Center for N...")
- 07:23, 12 July 2023 YAEL:Install prerequisites (hist | edit) [10,833 bytes] Michael S Beauchamp (talk | contribs) (Created page with "{{YAEL_Navigation_Bar}} __TOC__ YAEL displays results using a web browser, and is developed with Google Chrome (other browsers may have worse performance for complex graphics operations). ==Prerequisites for MacOS== ===1. Install R, version 4 or higher=== [https://cran.r-project.org/bin/macosx/ Click here to install the latest version of the R language for Mac.] Find the latest package (.pkg) file, click to download, then open and install. There are different versio...")
- 07:20, 12 July 2023 YAEL:Update (hist | edit) [1,655 bytes] Michael S Beauchamp (talk | contribs) (Created page with "{{YAEL_Navigation_Bar}} ===Updating and Upgrading YAEL=== Because YAEL runs on top of R and RStudio, it is important to update both of these before updating RAVE. For major updates (about every 6-12 months) it is necessary to completely reinstall: https://openwetware.org/wiki/YAEL:Install_prerequisites#2._R_and_R_Studio For minor updates, start RStudio, "Help"/"Check for Updates"; start R, "R"/"Check For R Updates"). Regardless of your current YAEL version, enter th...")
- 07:19, 12 July 2023 YAEL:Install (hist | edit) [2,982 bytes] Michael S Beauchamp (talk | contribs) (Created page with "{{YAEL_Navigation_Bar}} ==Step 1: Install prerequisites== <p style="font-size: 125%;"> Click on this link to <b>install the prerequisites.</b> <blockquote> ❗The most common installation problem is that the prerequisites are not installed. </blockquote> </p> ==Step 2: Install YAEL for the First Time== If you have installed YAEL before, please check How to update YAEL. 1. Open the "R" application if it is not alread...")
- 07:04, 12 July 2023 YAEL (hist | edit) [1,026 bytes] Michael S Beauchamp (talk | contribs) (Created page with "{{YAEL_Navigation_Bar}} __NOTOC__ <b>R</b>eproducible <b>A</b>nalysis and <b>V</b>isualization of intracranial <b>E</b>EG (RAVE) is free and open-source software for the analysis of intracranial electroencephalogram (iEEG) data, including data collected using strips and grids (electrocorticography, ECoG) and depth electrodes (stereotactic EEG). A sister package to RAVE is the YAEL electrode localization toolkit. <b>[https://www.dropbox.com/s/st0cw1aro4kmo2e/2022-poster-...")
- 12:29, 7 July 2023 Beauchamp:Software Installation OLD (hist | edit) [23,942 bytes] Michael S Beauchamp (talk | contribs) (Created page with "{{Beauchamp Navigation Bar}} <br> <div style="padding: 8px; color: #000000; background-color: #ffffff; width: 730px; border: 2px solid #666666;"> ==Current Version (Penn)== Beauchamp:Software_Installation ==Instructions For Installing AFNI are now here== Beauchamp:AFNI_Install == Computer Problems == If you have having software or hardware problems, submit a help ticket describing the problem. Do not be afraid to request help from MSIT. They are paid to help y...")
