Harvard:SysBio 204/2011
Link to updated website for SysBio204 2012
Contents
Course overview
- A course focusing on the rational design, construction, and applications of nucleic acid and protein-based synthetic molecular and cellular machinery and systems. Students are mentored to produce substantial term projects.
- Intended for graduate students in Systems Biology, Biophysics, Engineering, Biology and related disciplines. No formal prerequisites. Projects are tailored to each student's strengths and interests.
- Website: http://synthetic-biology-class.net, http://sb204.net
- Assignments: Midterm and Final Projects
Logistics
- Instructors: William Shih, Pamela Silver, Peng Yin
- Meeting time: 2 pm – 3:30 pm, Mon/Wed, Fall 2011
- Location: Room 521, Wyss Institute, 3 Blackfan circle, Boston, 02115
- First class on Wednesday August 31st.
- Location: CLSB521
- No exams
- Prerequisites: none
- Grading
- 20% Participation
- 40% Midterm projects
- 40% Final project
- Harvard Course Site
Background Info and previous class projects
- http://openwetware.org/wiki/Biophysics_242r/2009 (Synthetic Biology)
- http://openwetware.org/wiki/Harvard:Biophysics_242r/2011 (Biologically Inspired Molecular Engineering)
Example topics for final design project
- miRNA pattern recognition in eukaryotic cells
- Directed evolution of chemical sensors
- Nano-breadboards for probing electron transport in proteins
- Altered genetic codes and amino acid alphabets
- Modification of proteins for function in harsh environments
- Automatable assembly of large synthetic genes and circuits
- Synthetic biology of stem cells and epigenetic reprogramming pathways
- Structural re-engineering of adenoviruses
- Artificial chemotactic swimmers
- Nonequilibrium networks of nano-machines mimicking dynamic instability in the cytoskeleton
- Recombinase-based multi-state memory in bacteria
- Exosome manufacturing
- Self-assembled solar energy harvester based on bio-inorganic nano-antennae for uv-vis
- Systematic debugging of DNA labeling chemistries by atomic-resolution TEM imaging of DNA origami
- Transcriptional activation and repression through rational molecular design
- Tissue engineering scaffold nano-materials
- Programmable multistep chemical synthesis by templating on catalytic nanostructures
- Ultra-sensitive signal processing for synthetic biology
- Antibody 2.0
- Synthetic nanostructure - virus conjugates
- Replication of information in synthetic crystals
- Cheap large-scale production of protein or DNA-based materials
- Etc. Etc. Etc.
Recent changes
- N
- This edit created a new page (also see list of new pages)
- m
- This is a minor edit
- b
- This edit was performed by a bot
- (±123)
- The page size changed by this number of bytes
18 April 2019
|
|
|
14:56 |
Droplet Microfluidics: Emulsion Droplets- Wenyun Wang (15 changes | history) . . (+1,636) . . [Wenyunwang (15×)] |
||
|
|
(cur | prev) . . (+1) . . Wenyunwang (talk | contribs) (→Multiple Emulsions) |
||||
|
|
(cur | prev) . . (0) . . Wenyunwang (talk | contribs) (→Introduction) |
||||
|
|
(cur | prev) . . (+32) . . Wenyunwang (talk | contribs) (→References) |
||||
|
|
(cur | prev) . . (+168) . . Wenyunwang (talk | contribs) (→Applications) |
||||
|
|
(cur | prev) . . (-1) . . Wenyunwang (talk | contribs) (→Multiple Emulsions) |
||||
|
|
(cur | prev) . . (-130) . . Wenyunwang (talk | contribs) (→Applications) |
||||
|
|
(cur | prev) . . (-61) . . Wenyunwang (talk | contribs) (→Applications) |
||||
|
|
(cur | prev) . . (-7) . . Wenyunwang (talk | contribs) (→Multiple Emulsions) |
||||
|
|
(cur | prev) . . (-2) . . Wenyunwang (talk | contribs) (→Introduction) |
||||
|
|
(cur | prev) . . (-2) . . Wenyunwang (talk | contribs) (→Multiple Emulsions) |
||||
|
|
(cur | prev) . . (-214) . . Wenyunwang (talk | contribs) (→Multiple Emulsions) |
||||
|
|
(cur | prev) . . (+1) . . Wenyunwang (talk | contribs) (→Introduction) |
||||
|
|
(cur | prev) . . (+1) . . Wenyunwang (talk | contribs) (→Introduction) |
||||
|
|
(cur | prev) . . (+20) . . Wenyunwang (talk | contribs) (→Introduction) |
||||
|
|
(cur | prev) . . (+1,830) . . Wenyunwang (talk | contribs) |
||||
|
|
|
14:34 |
(Upload log) . . [Minwiki; Wenyunwang (3×); Matt labbe (4×)] |
||
|
|
14:34 . . Wenyunwang (talk | contribs) uploaded a new version of File:Double emulsions.png |
||||
|
|
14:28 . . Wenyunwang (talk | contribs) uploaded File:Double emulsions.png |
||||
|
|
14:21 . . Wenyunwang (talk | contribs) uploaded File:Emulsions.png |
||||
|
|
12:11 . . Matt labbe (talk | contribs) uploaded File:Droplet Circulation.png |
||||
|
|
11:47 . . Matt labbe (talk | contribs) uploaded File:SAW Movement.png |
||||
|
|
11:38 . . Matt labbe (talk | contribs) uploaded File:Rayleigh Wave.jpg |
||||
|
|
11:30 . . Matt labbe (talk | contribs) uploaded File:SAW Sensor.gif |
||||
|
|
08:18 . . Minwiki (talk | contribs) uploaded File:Min6.PNG |
||||
|
|
|
12:45 |
Surface Acoustic Waves (SAWs) - Matt Labbe (14 changes | history) . . (+771) . . [Matt labbe (14×)] |
||
|
|
(cur | prev) . . (-4) . . Matt labbe (talk | contribs) |
||||
|
|
(cur | prev) . . (+214) . . Matt labbe (talk | contribs) |
||||
|
|
(cur | prev) . . (-3) . . Matt labbe (talk | contribs) |
||||
|
|
(cur | prev) . . (+1) . . Matt labbe (talk | contribs) |
||||
|
|
(cur | prev) . . (+1) . . Matt labbe (talk | contribs) |
||||
|
|
(cur | prev) . . (+229) . . Matt labbe (talk | contribs) |
||||
|
|
(cur | prev) . . (+122) . . Matt labbe (talk | contribs) |
||||
|
|
(cur | prev) . . (+13) . . Matt labbe (talk | contribs) |
||||
|
|
(cur | prev) . . (+9) . . Matt labbe (talk | contribs) |
||||
|
|
(cur | prev) . . (+108) . . Matt labbe (talk | contribs) |
||||
|
|
(cur | prev) . . (+4) . . Matt labbe (talk | contribs) |
||||
|
|
(cur | prev) . . (+101) . . Matt labbe (talk | contribs) |
||||
|
|
(cur | prev) . . (+1) . . Matt labbe (talk | contribs) |
||||
|
|
(cur | prev) . . (-25) . . Matt labbe (talk | contribs) |
||||
|
|
|
09:13 |
Liquid-Liquid Extraction in Microchemical Channels - Jacob Brandner (4 changes | history) . . (+886) . . [Jbrandner1 (4×)] |
||
|
|
(cur | prev) . . (+70) . . Jbrandner1 (talk | contribs) (→Aqueous Two-Phase Systems (ATPs)) |
||||
|
|
(cur | prev) . . (+552) . . Jbrandner1 (talk | contribs) (→Aqueous Two-Phase Systems) |
||||
|
|
(cur | prev) . . (+251) . . Jbrandner1 (talk | contribs) (→References) |
||||
|
|
(cur | prev) . . (+13) . . Jbrandner1 (talk | contribs) (→Aqueous Two-Phase Systems) |
||||
|
|
|
08:38 |
2D Mammalian Cells Culture - Min Zeng (6 changes | history) . . (+18) . . [Minwiki (6×)] |
||
|
|
(cur | prev) . . (0) . . Minwiki (talk | contribs) (→Non-recirculating culture vs. recirculating culture) |
||||
|
|
(cur | prev) . . (0) . . Minwiki (talk | contribs) (→Operation of microfluidic devices) |
||||
|
|
(cur | prev) . . (+3) . . Minwiki (talk | contribs) (→Significance of mammalian cell culture at microscale) |
||||
|
|
(cur | prev) . . (+15) . . Minwiki (talk | contribs) (→Significance of mammalian cell culture at microscale) |
||||
|
|
(cur | prev) . . (0) . . Minwiki (talk | contribs) (→Significance of mammalian cell culture at microscale) |
||||
|
|
(cur | prev) . . (0) . . Minwiki (talk | contribs) (→Significance of mammalian cell culture at microscale) |
||||
|
|
|
08:12 |
Stokes Trap- William McInerney (3 changes | history) . . (+50) . . [Wilmac39 (3×)] |
||
|
|
(cur | prev) . . (+1,129) . . Wilmac39 (talk | contribs) (→Hydrodynamic Trapping in Combination with Other Methods) |
||||
|
|
(cur | prev) . . (-542) . . Wilmac39 (talk | contribs) (→Particle Manipulation) |
||||
|
|
(cur | prev) . . (-537) . . Wilmac39 (talk | contribs) (→Particle Assembly) |
||||
