Harvard:Biophysics 242r/2011

From OpenWetWare
Jump to navigationJump to search

Biophysics 242r/2011

Biologically Inspired Molecular Engineering

DNA nanostructure logo 2010-10-23.png

Home        People        Schedule        Project        Tools        Help       


Course overview

  • Graduate level seminar focusing on in-silico design pipelines for nucleic acid- and protein-based molecular machinery and programmable molecular systems. Students are mentored to produce substantial midterm and final group design projects.
  • No formal prerequisites. Projects are tailored to each student's strengths and interests.


Example topics for final design project

  • Artificial chemotactic swimmers
  • Nonequilibrium networks of nano-machines mimicking dynamic instability in the cytoskeleton
  • Nucleic acid logic automata responsive to microRNAs in serum
  • Self-assembled solar energy harvester based on bio-inorganic nano-antennae for uv-vis
  • Systematic debugging of DNA labeling chemistries by atomic-resolution TEM imaging of DNA origami
  • Light-controlled transcriptional activation and repression through rational molecular design
  • Directed evolution of tissue engineering scaffold nano-materials
  • Programmable multistep chemical synthesis by templating on nanostructures
  • Ultra-sensitive molecular signal processing for synthetic biology
  • Synthetic nanostructure - virus conjugates
  • Nano-breadboards for probing electron transport in proteins
  • Replication of information in synthetic crystals
  • Etc.


Logistics

  • Meeting time: 2011 Spring Term, Mondays and Wednesdays, 100 pm — 230 pm, with optional sessions for working on projects from 230 pm to 330 pm, starting on Monday, February 7
  • Form teams for midterm projects on Monday, February 7
  • Form teams for final projects on Monday, March 21
  • First class on Monday, January 24
  • Location: CLSB521
  • No exams
  • Prerequisites: none
  • Grading
    • 33% Participation
    • 33% Midterm project
    • 33% Final project
  • Harvard course site
  • Harvard:Biophysics_242r/2011/Course Development Log


Background Info and previous class projects


Recent changes

List of abbreviations:
N
This edit created a new page (also see list of new pages)
m
This is a minor edit
b
This edit was performed by a bot
(±123)
The page size changed by this number of bytes

21 September 2020

     07:26  Yeo lab:news archive diffhist +128 Yoonyeo talk contribs →‎2019
     07:26  Yeo lab diffhist -37 Yoonyeo talk contribs →‎News
N    00:04  User:Bonhivers/Notebook/BIL421/Entry Base diffhist +950 Bonhivers talk contribs Autocreated Lab Notebook name=User:Bonhivers/Notebook/BIL421/Entry Base, content from MediaWiki:EntryContentDefault
N    00:04  User:Bonhivers/Notebook/BIL421 diffhist +1,574 Bonhivers talk contribs Autocreated Lab Notebook name=User:Bonhivers/Notebook/BIL421, content from MediaWiki:ProjectContentDefault
N    00:04  User:Bonhivers/Notebook diffhist +75 Bonhivers talk contribs Autocreated Lab Notebook name=User:Bonhivers/Notebook, content from MediaWiki:NotebookContentDefault

20 September 2020

     22:22  Nathan R Beshai Week 3‎‎ 3 changes history +2,532 [Nathan R. Beshai‎ (3×)]
     
22:22 (cur | prev) +1,750 Nathan R. Beshai talk contribs added 2 figures
     
13:28 (cur | prev) 0 Nathan R. Beshai talk contribs changed spelling
     
13:28 (cur | prev) +782 Nathan R. Beshai talk contribs Finished Introduction
     22:10  Lee:JC‎‎ 2 changes history +58 [Wooin Lee‎ (2×)]
     
22:10 (cur | prev) +35 Wooin Lee talk contribs →‎2020
     
22:04 (cur | prev) +23 Wooin Lee talk contribs →‎2020
     21:52  (Upload log) [Mahesh Chandra Patra‎; Nathan R. Beshai‎ (4×)]
     
21:52 Nathan R. Beshai talk contribs uploaded File:Nathan figure4.png(Added figure 4)
     
21:51 Nathan R. Beshai talk contribs uploaded File:Nathan figure3.png(added figure3)
     
21:50 Nathan R. Beshai talk contribs uploaded File:Nathan figure2.png
     
21:50 Nathan R. Beshai talk contribs uploaded File:Nathan figure1.png(added figure 1)
     
20:10 Mahesh Chandra Patra talk contribs uploaded File:Snk-fig-slash.png
     20:18  Sangdunchoi:company‎‎ 27 changes history +99 [Mahesh Chandra Patra‎ (27×)]
     
20:18 (cur | prev) +33 Mahesh Chandra Patra talk contribs →‎Contact
     
20:18 (cur | prev) +33 Mahesh Chandra Patra talk contribs →‎Notice
     
20:17 (cur | prev) 0 Mahesh Chandra Patra talk contribs →‎20px S&K News
     
20:17 (cur | prev) 0 Mahesh Chandra Patra talk contribs →‎20px R&D
     
20:17 (cur | prev) 0 Mahesh Chandra Patra talk contribs →‎20px Vision
     
20:16 (cur | prev) 0 Mahesh Chandra Patra talk contribs →‎10px About snktherapeutics.com
     
20:16 (cur | prev) 0 Mahesh Chandra Patra talk contribs →‎20px About snktherapeutics.com
     
20:16 (cur | prev) 0 Mahesh Chandra Patra talk contribs →‎20px S&K Therapeutics
     
20:15 (cur | prev) +33 Mahesh Chandra Patra talk contribs →‎S&K News
     
20:15 (cur | prev) -2 Mahesh Chandra Patra talk contribs →‎Target
     
20:14 (cur | prev) +33 Mahesh Chandra Patra talk contribs →‎R&D
     
20:13 (cur | prev) -1 Mahesh Chandra Patra talk contribs →‎20px S&K Therapeutics
     
20:13 (cur | prev) +33 Mahesh Chandra Patra talk contribs →‎Vision
     
20:13 (cur | prev) +1 Mahesh Chandra Patra talk contribs →‎20px S&K Therapeutics
     
20:13 (cur | prev) 0 Mahesh Chandra Patra talk contribs →‎30px About snktherapeutics.com
     
20:12 (cur | prev) 0 Mahesh Chandra Patra talk contribs →‎10px S&K Therapeutics
     
20:12 (cur | prev) +1 Mahesh Chandra Patra talk contribs →‎30pxS&K Therapeutics
     
20:12 (cur | prev) +1 Mahesh Chandra Patra talk contribs →‎30pxAbout snktherapeutics.com
     
20:12 (cur | prev) +32 Mahesh Chandra Patra talk contribs →‎About snktherapeutics.com
     
20:11 (cur | prev) +32 Mahesh Chandra Patra talk contribs →‎S&K Therapeutics
     
01:52 (cur | prev) -25 Mahesh Chandra Patra talk contribs
     
01:50 (cur | prev) +25 Mahesh Chandra Patra talk contribs
     
01:49 (cur | prev) 0 Mahesh Chandra Patra talk contribs →‎S&K Therapeutics
     
01:48 (cur | prev) +4 Mahesh Chandra Patra talk contribs →‎S&K Therapeutics
     
01:48 (cur | prev) -4 Mahesh Chandra Patra talk contribs →‎S&K Therapeutics
     
01:47 (cur | prev) -98 Mahesh Chandra Patra talk contribs
     
01:43 (cur | prev) -32 Mahesh Chandra Patra talk contribs
     08:36  User:Owen R. Dailey‎‎ 4 changes history +92 [Owen R. Dailey‎ (4×)]
     
08:36 (cur | prev) -6 Owen R. Dailey talk contribs →‎Acknowledgements: Fixed a typo
     
08:36 (cur | prev) +28 Owen R. Dailey talk contribs →‎Acknowledgements: Linked my homework partner's user page
     
08:19 (cur | prev) +6 Owen R. Dailey talk contribs →‎Personal Interests and Hobbies: Made the sports teams headers smaller
     
08:18 (cur | prev) +64 Owen R. Dailey talk contribs →‎Sports: Added headers for sports teams
     08:33  Template:Owen R. Dailey‎‎ 3 changes history +765 [Owen R. Dailey‎ (3×)]
     
08:33 (cur | prev) +1 Owen R. Dailey talk contribs →‎Idividual Journals: Corrected a typo in the word "individual"
     
08:33 (cur | prev) +489 Owen R. Dailey talk contribs →‎Class Journals: Added labels
     
08:21 (cur | prev) +275 Owen R. Dailey talk contribs →‎Assignments: Added labels to links

19 September 2020