User:Vincent Rouilly: Difference between revisions

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email: vincent.rouilly [-at-] gmail [-dot-] com
email: vincent.rouilly [-at-] gmail [-dot-] com


Basel, Switzerland
Paris, France.


[http://www.linkedin.com/in/vincentrouilly join my LinkedIn Network]
[http://www.linkedin.com/in/vincentrouilly join my LinkedIn Network]
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* '''Research interests''':
** Synthetic Biology: Part Characterisation and Standardisation
** Computational Biology: Stochastic Gene Expression, Rational Nucleic Acid Probe design.
** Laboratory Automation and High Content Screening Analysis


== Work Experiences ==
== Work Experiences ==
* Bioinformatician, LabEx Milieu Interieur, Institut Pasteur, Paris France.
* Bioinformatician, LabEx Milieu Interieur, Institut Pasteur, Paris France (Current).
* Data Analyst & Scientific Software Programmer, ResearchIT, University of Basel, Switzerland.
* Data Analyst & Scientific Software Programmer, ResearchIT, University of Basel, Switzerland.
* Research Associate, Institute of Systems and Synthetic Biology, Imperial College London
* Research Associate, Institute of Systems and Synthetic Biology, Imperial College London
* GE Medical Systems, Paris, Software R&D Engineer.
* GE Medical Systems, Paris, Software R&D Engineer, Image Processing on digital mammography systems.
* Visiospace, Paris, Software R&D Engineer.
* Visiospace, Paris, Software R&D Engineer.


== Education ==  
== Education ==  
* PhD,Department of Bioengineering, Imperial College London.
* PhD, Computational Biology, Department of Bioengineering, Imperial College London.
* M.Sc, ENST Paris and ERASMUS exchange at ETSIT Madrid (Signal and Image Processing Major).
* M.Sc, ENST Paris and ERASMUS exchange at ETSIT Madrid (Signal and Image Processing Major).


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(or how to keep track of what is happening in the Synthetic Biology community)
(or how to keep track of what is happening in the Synthetic Biology community)


* '''TATAvox Blog''': [http://tatavox.wordpress.com link]  
<!--* '''TATAvox Blog''': [http://tatavox.wordpress.com link] -->
* '''Personal Tweeter Feed''' : [http://twitter.com/vrouilly link]
* '''Tweeter Feed on SynBioNews''' : [http://twitter.com/SynBioNews link]
* '''Tweeter Feed on SynBioNews''' : [http://twitter.com/SynBioNews link]
* '''Facebook group on synthetic biology''': [http://www.facebook.com/#!/group.php?gid=2204701004&ref=mf link]
* '''Facebook group on synthetic biology''': [http://www.facebook.com/#!/group.php?gid=2204701004&ref=mf link]
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* [[User:Vincent Rouilly/Distributed Annotation System (DAS) for DNA Part Registries | DAS server on Google App Engine for DNA parts]]
* [[User:Vincent Rouilly/Distributed Annotation System (DAS) for DNA Part Registries | DAS server on Google App Engine for DNA parts]]


==Current Projects==
==Past Projects==
* '''Recombineering for Synthetic Biology'''
* '''Recombineering for Synthetic Biology'''
** Homology recombination-based promoter screening construct.
** Homology recombination-based promoter screening construct.
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* [http://www.tincantools.com TinCanTools: embedded ARM boards for engineers, programmers, and enthusiasts]
* [http://www.tincantools.com TinCanTools: embedded ARM boards for engineers, programmers, and enthusiasts]
* [http://www.phidgets.com/ Phidgets: Sensing/Control building blocks from your PC]
* [http://www.phidgets.com/ Phidgets: Sensing/Control building blocks from your PC]
 
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== OWW ideas (random) ==
== OWW ideas (random) ==
=== building a stronger community ===
=== building a stronger community ===
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**image annotation (microscope images, gel analysis, colonies plate ..) see iNote, SVG.
**image annotation (microscope images, gel analysis, colonies plate ..) see iNote, SVG.
**graph editor/viewer to build/view/run kinetic models (SBML, CellML ...)
**graph editor/viewer to build/view/run kinetic models (SBML, CellML ...)
 
-->
== Project ==
== Project ==
Here is an overview of the modelling framework I am working on:
Here is an overview of the modelling framework I am working on:
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