20.109(S13): Spring 2013 schedule: Difference between revisions
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===Table view with links=== | |||
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| [[20.109(S13):Lab tour | Orientation]] | | [[20.109(S13):Lab tour | Orientation]] | ||
| *[[Media:20.109 OrientLect(S13).pdf | Introductory Lecture (PDF)]] <br>*[[Media:S13_Orient_Pre-Lab-ANS.pdf | Intro Pre-Lab, T/R]] | | *[[Media:20.109 OrientLect(S13).pdf | Introductory Lecture (PDF)]] <br>*[[Media:S13_Orient_Pre-Lab-ANS.pdf | Intro Pre-Lab, T/R]]<br>*[[Media:M1D0_SKH_prelab_final.pdf | Intro Pre-Lab, W/F]] | ||
|-- | |-- | ||
| colspan="7" | | | colspan="7" | | ||
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| Thur/Fri Feb 7/8 | | Thur/Fri Feb 7/8 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| | | [[User:Ian_Tay |Ian]] | ||
| [[20.109(S13):Context-setting and primer design (Day1)| Context-setting and primer design]] | | [[20.109(S13):Context-setting and primer design (Day1)| Context-setting and primer design]] | ||
| | |*[[Media:20109_S13-M1Lec1_Runstadler.pdf | M1D1 Lecture]] <br>*[[Media:S13_M1D1-ANS.pdf | T/R Pre-Lab]]<br>*[[Media:M1D1_lab_SKH.pdf | W/F Pre-Lab]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
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| Tue/Wed Feb 12/13 | | Tue/Wed Feb 12/13 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| | | [[User:Ian_Tay |Ian]] | ||
| [[20.109(S13):DNA extraction (Day2)| DNA extraction]] | | [[20.109(S13):DNA extraction (Day2)| DNA extraction]] | ||
| | |*[[Media:20109_S13-M1Lec2_Runstadler.pdf | M1D2 Lecture]] <br>*[[Media:S13_M1D2-ANS.pdf | T/R Pre-Lab (green text added later)]]<br>*[[Media:M1D2_lab_SKH_final.pdf | W/F Pre-Lab]]<br>[[Media:20.109_SP13_Roldan.pdf | T/R WAC talk]]<br>[[Media:20.109S13INTROmpo.pdf | W/F WAC talk]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
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| Thur/Fri Feb 14/15 | | Thur/Fri Feb 14/15 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| | | [[User:Ian_Tay |Ian]] | ||
| [[20.109(S13):PCR and paper discussion (Day3)| PCR and paper discussion]] | | [[20.109(S13):PCR and paper discussion (Day3)| PCR and paper discussion]] | ||
| | |*[[Media:20109_S13-M1Lec3_Runstadler.pdf | M1D3 Lecture]] <br>*[[Media:S13_M1D3-ANS.pdf | T/R Pre-Lab]]<br>*[[Media:M1D3_lab_SKH_final.pdf | W/F Pre-Lab]] | ||
|-- | |-- | ||
| | | | ||
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| Thur/Fri Feb 21/22 | | Thur/Fri Feb 21/22 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| | | [[User:Ian_Tay |Ian]] | ||
| [[20.109(S13):DNA cloning (Day4)| DNA cloning]] | | [[20.109(S13):DNA cloning (Day4)| DNA cloning]] | ||
| | |*[[Media:20109_S13-M1Lec4_Runstadler.pdf | M1D4 Lecture]] <br>*[[Media:S13_M1D4-ANS.pdf | T/R Pre-Lab]]<br>*[[Media:M1D4_SKH.pdf | W/F Pre-Lab]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
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| Tue/Wed Feb 26/27 | | Tue/Wed Feb 26/27 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| | | [[User:Ian_Tay |Ian]] | ||
| [[20.109(S13):DNA sequencing and primer analysis (Day5)| DNA sequencing and primer analysis]] | | [[20.109(S13):DNA sequencing and primer analysis (Day5)| DNA sequencing and primer analysis]] | ||
| | |*[[Media:20109_S13-M1Lec5_Runstadler.pdf | M1D5 Lecture]] <br>*[[Media:S13_M1D5-ANS.pdf | T/R Pre-Lab]]<br>*[[Media:M1D5_SKH_Final.pdf | W/F Pre-Lab]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
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| Thur/Fri Feb 28/ Mar 1 | | Thur/Fri Feb 28/ Mar 1 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| | | [[User:Ian_Tay |Ian]] | ||
| [[20.109(S13):Journal club I (Day6)| Journal club I]] | | [[20.109(S13):Journal club I (Day6)| Journal club I]] | ||
| | |*[[Media:20109_S13-M1Lec6_Runstadler.pdf | M1D6 Lecture]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
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| Tue/Wed Mar 5/6 | | Tue/Wed Mar 5/6 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| | | [[User:Ian_Tay |Ian]] | ||
| [[20.109(S13):Phylogenetic analysis (Day7)| Phylogenetic analysis]] | | [[20.109(S13):Phylogenetic analysis (Day7)| Phylogenetic analysis]] | ||
| | | | ||
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| Tue/Wed Mar 12/13 | | Tue/Wed Mar 12/13 | ||
| [http://web.mit.edu/be/people/jasanoff.shtml AJ] | | [http://web.mit.edu/be/people/jasanoff.shtml AJ] | ||
| | | [[User:Mark_Mimee |MM]] | ||
|[[20.109(S13):Design mutant (Day1)| Design mutant]] | |[[20.109(S13):Design mutant (Day1)| Design mutant]] | ||
|<br><font color = CC0000><b>Module 1 Draft Due</b></font color><br> | |<br><font color = CC0000><b>Module 1 Draft Due</b></font color><br> | ||
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| Thur/Fri Mar 14/15 | | Thur/Fri Mar 14/15 | ||
| [http://web.mit.edu/be/people/jasanoff.shtml AJ] | | [http://web.mit.edu/be/people/jasanoff.shtml AJ] | ||
| | |[[User:Mark_Mimee |MM]] | ||
|[[20.109(S13):Site-directed mutagenesis (Day2)| Site-directed mutagenesis]] | |[[20.109(S13):Site-directed mutagenesis (Day2)| Site-directed mutagenesis]] | ||
| | | | ||
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| Tue/Wed Mar 19/20 | | Tue/Wed Mar 19/20 | ||
| [http://web.mit.edu/be/people/jasanoff.shtml AJ] | | [http://web.mit.edu/be/people/jasanoff.shtml AJ] | ||
| | | [[User:Mark_Mimee |MM]] | ||
|[[20.109(S13):Bacterial amplification of DNA (Day3)| Bacterial amplification of DNA]] | |[[20.109(S13):Bacterial amplification of DNA (Day3)| Bacterial amplification of DNA]] | ||
| | |<br><font color = CC0000><b>Module 1 Primer Summary Due</b></font color><br> | ||
|-- | |-- | ||
| 2 | | 2 | ||
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| Thur/Fri Mar 21/22 | | Thur/Fri Mar 21/22 | ||
| [http://web.mit.edu/be/people/jasanoff.shtml AJ] | | [http://web.mit.edu/be/people/jasanoff.shtml AJ] | ||
| | |[[User:Mark_Mimee |MM]] | ||
|[[20.109(S13):Prepare expression system (Day4)| Prepare expression system]] | |[[20.109(S13):Prepare expression system (Day4)| Prepare expression system]] | ||
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| Tue/Wed Apr 2/3 | | Tue/Wed Apr 2/3 | ||
| [http://web.mit.edu/be/people/jasanoff.shtml AJ] | | [http://web.mit.edu/be/people/jasanoff.shtml AJ] | ||
| | | [[User:Mark_Mimee |MM]] | ||
|[[20.109(S13):Induce protein and evaluate DNA (Day5)| Induce protein and evaluate DNA]] | |[[20.109(S13):Induce protein and evaluate DNA (Day5)| Induce protein and evaluate DNA]] | ||
| | | | ||
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| Thur/Fri Apr 4/5 | | Thur/Fri Apr 4/5 | ||
| [http://web.mit.edu/be/people/jasanoff.shtml AJ] | | [http://web.mit.edu/be/people/jasanoff.shtml AJ] | ||
| | |[[User:Mark_Mimee |MM]] | ||
|[[20.109(S13):Purify protein (Day6)| Purify protein]] | |[[20.109(S13):Purify protein (Day6)| Purify protein]] | ||
|<br><font color = CC0000><b>Module 1 Revision Due</b></font color><br> | |<br><font color = CC0000><b>Module 1 Revision Due</b></font color><br> | ||
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| Tue/Wed Apr 9/10 | | Tue/Wed Apr 9/10 | ||
| [http://web.mit.edu/be/people/jasanoff.shtml AJ] | | [http://web.mit.edu/be/people/jasanoff.shtml AJ] | ||
| | | [[User:Mark_Mimee |MM]] | ||
|[[20.109(S13):Characterize protein expression (Day7)| Characterize protein expression]] | |[[20.109(S13):Characterize protein expression (Day7)| Characterize protein expression]] | ||
| | | | ||
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| Thur/Fri Apr 11/12 | | Thur/Fri Apr 11/12 | ||
| [http://web.mit.edu/be/people/jasanoff.shtml AJ] | | [http://web.mit.edu/be/people/jasanoff.shtml AJ] | ||
| | |[[User:Mark_Mimee |MM]] | ||
|[[20.109(S13):Assess protein function (Day8)| Assess protein function]] | |[[20.109(S13):Assess protein function (Day8)| Assess protein function]] | ||
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| [[20.109(S13):Protein-level and wrap-up analysis (Day7)| Protein-level and wrap-up analysis]] | | [[20.109(S13):Protein-level and wrap-up analysis (Day7)| Protein-level and wrap-up analysis]] | ||
| <br><font color = CC0000><b>Module 3 | | <br><font color = CC0000><b>Module 3 Summary Due</b></font color><br> | ||
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|} | |} | ||
</center> | |||
<br style="clear:both;"/> | |||
===Google calendar view=== | |||
I have decided to invite you all to the calendar instead of embedding it here, due to color-coding of assignments not being transferred upon embedding. Please let me know if you did not receive an invitation. | |||
So far quiz dates and major assignments are included. Soon dates for lab notebooks and reflections will be included, along with links to homework assignments. | |||
Correction: I will embed (for those who want privacy), and also invite (for those who want to use their gmail accounts). | |||
<html><iframe src="https://www.google.com/calendar/embed?src=89c4e1q4e1kcncrq5s08qrqk9o%40group.calendar.google.com&ctz=America/New_York" style="border: 0" width="800" height="600" frameborder="0" scrolling="no"></iframe> </html> |
Revision as of 07:43, 3 March 2013
Table view with links
MODULE | DAY | DATE | LECTURER | TA | LAB | NOTES |
Tue/Wed Feb 5/6 | ANS | Orientation | * Introductory Lecture (PDF) * Intro Pre-Lab, T/R * Intro Pre-Lab, W/F | |||
1 | 1 | Thur/Fri Feb 7/8 | JR | Ian | Context-setting and primer design | * M1D1 Lecture * T/R Pre-Lab * W/F Pre-Lab |
1 | 2 | Tue/Wed Feb 12/13 | JR | Ian | DNA extraction | * M1D2 Lecture * T/R Pre-Lab (green text added later) * W/F Pre-Lab T/R WAC talk W/F WAC talk |
1 | 3 | Thur/Fri Feb 14/15 | JR | Ian | PCR and paper discussion | * M1D3 Lecture * T/R Pre-Lab * W/F Pre-Lab |
President's Day Feb 18 | No lab Feb 19 or Feb 20 | |||||
---|---|---|---|---|---|---|
1 | 4 | Thur/Fri Feb 21/22 | JR | Ian | DNA cloning | * M1D4 Lecture * T/R Pre-Lab * W/F Pre-Lab |
1 | 5 | Tue/Wed Feb 26/27 | JR | Ian | DNA sequencing and primer analysis | * M1D5 Lecture * T/R Pre-Lab * W/F Pre-Lab |
1 | 6 | Thur/Fri Feb 28/ Mar 1 | JR | Ian | Journal club I | * M1D6 Lecture |
1 | 7 | Tue/Wed Mar 5/6 | JR | Ian | Phylogenetic analysis | |
1 | 8 | Thur/Fri Mar 7/8 | NO LECTURE TODAY | Journal club II | ||
2 | 1 | Tue/Wed Mar 12/13 | AJ | MM | Design mutant | Module 1 Draft Due |
2 | 2 | Thur/Fri Mar 14/15 | AJ | MM | Site-directed mutagenesis | |
2 | 3 | Tue/Wed Mar 19/20 | AJ | MM | Bacterial amplification of DNA | Module 1 Primer Summary Due |
2 | 4 | Thur/Fri Mar 21/22 | AJ | MM | Prepare expression system | |
Spring Break Mar 25-29 | No lab all week | |||||
2 | 5 | Tue/Wed Apr 2/3 | AJ | MM | Induce protein and evaluate DNA | |
2 | 6 | Thur/Fri Apr 4/5 | AJ | MM | Purify protein | Module 1 Revision Due |
2 | 7 | Tue/Wed Apr 9/10 | AJ | MM | Characterize protein expression | |
2 | 8 | Thur/Fri Apr 11/12 | AJ | MM | Assess protein function | |
Patriot's Day April 15-16 | No lab Apr 16 or Apr 17 | |||||
3 | 1 | Thur/Fri Apr 18/19 | ANS | Design experiment | ||
3 | 2 | Tue/Wed Apr 23/24 | ANS | Initiate cell culture | Module 2 Report Due MONDAY APRIL 22 by 5 pm for all. | |
3 | 3 | Thur/Fri Apr 25/26 | ANS | Testing cell viability | ||
3 | 4 | Tue/Wed Apr 30/May 1 | ANS | Preparing cells for analysis | ||
3 | 5 | Thur/Fri May 2/3 | ANS | Initiating transcript and protein assays | ||
3 | 6 | Tue/Wed May 7/8 | ANS | Transcript-level analysis | ||
3 | 7 | Thur/Fri May 9/10 | ANS | Protein-level and wrap-up analysis | Module 3 Summary Due | |
3 | 8 | Tue/Wed May 14/15 | ANS | Student presentations | ||
Thur May 16 | No lab session. Evaluations during lecture, then celebratory lunch, room/time TBD |
Google calendar view
I have decided to invite you all to the calendar instead of embedding it here, due to color-coding of assignments not being transferred upon embedding. Please let me know if you did not receive an invitation.
So far quiz dates and major assignments are included. Soon dates for lab notebooks and reflections will be included, along with links to homework assignments.
Correction: I will embed (for those who want privacy), and also invite (for those who want to use their gmail accounts).
<html><iframe src="https://www.google.com/calendar/embed?src=89c4e1q4e1kcncrq5s08qrqk9o%40group.calendar.google.com&ctz=America/New_York" style="border: 0" width="800" height="600" frameborder="0" scrolling="no"></iframe> </html>