MODULE
|
DAY
|
DATE
|
LECTURER
|
TA
|
LAB
|
NOTES
|
|
|
Tue/Wed Feb 4/5
|
ANS
|
Chris
|
Orientation
|
Introductory Lecture (PDF) T/R Pre-Lab W/F Pre-Lab
|
|
1
|
1
|
Thur/Fri Feb 6/7
|
JR
|
Chris
|
Microbial DNA extraction
|
lab orientation quiz Lecture L1 Notes T/R Pre-Lab W/F Pre-Lab
|
1
|
2
|
Tue/Wed Feb 11/12
|
JR
|
Chris
|
Diagnostic primer design
|
Lecture L2 Notes T/R Pre-lab W/F Pre-Lab
|
1
|
3
|
Thur/Fri Feb 13/14
|
JR
|
Chris
|
16S PCR and paper discussion
|
lab quiz Lecture L3 Notes T/R Pre-lab W/F Pre-Lab WAC lecture, talks
|
|
|
President's Day Feb 17
|
No lab Feb 18 or Feb 19
|
1
|
4
|
Thur/Fri Feb 20/21
|
JR
|
Chris
|
DNA cloning
|
L4 Notes T/R Pre-lab W/F Pre-Lab WAC lecture, figures
|
1
|
5
|
Tue/Wed Feb 25/26
|
JR
|
Chris
|
DNA sequencing
|
lab quiz Lecture L5 notes T/R Pre-lab W/F Pre-lab
|
1
|
6
|
Thur/Fri Feb 27/28
|
JR
|
Chris
|
Journal club I
|
Lecture L6 notes
|
1
|
7
|
Tue/Wed Mar 4/5
|
JR
|
Chris
|
Phylogenetic and primer analyses
|
Lecture T/R Pre-lab W/F Pre-Lab
|
1
|
8
|
Thur/Fri Mar 6/7
|
JR
|
Chris
|
Journal club II
|
lab quiz Lecture L7/8 notes WAC lecture, abstracts
|
|
2
|
1
|
Tue/Wed Mar 11/12
|
LS
|
SV
|
Introduction to cell strains and plating
|
Lecture T/R Prelab W/F Pre-Lab WAC lecture, IMRD Draft Mod 1 Abstract and Summary Due WED 1 PM
|
2
|
2
|
Thur/Fri Mar 13/14
|
LS
|
SV
|
Begin Western protein analysis
|
Lecture T/R Prelab W/F Pre-Lab
|
2
|
3
|
Tue/Wed Mar 18/19
|
LS
|
SV
|
Choose system conditions and paper discussion
|
Mod 1 Memo Due lab quiz Lecture T/R Pre-Lab W/F Pre-Lab
|
2
|
4
|
Thur/Fri Mar 20/21
|
LS
|
SV
|
Complete Western and prepare damaged DNA
|
Lecture T/R Pre-lab W/F Pre-Lab
|
|
|
Spring Break Mar 24-28
|
No lab all week
|
2
|
5
|
Tue/Wed Apr 1/2
|
LS
|
SV
|
Cell preparation for DNA repair assays
|
lab quiz Lecture T/R Pre-Lab W/F Pre-Lab
|
2
|
6
|
Thur/Fri Apr 3/4
|
LS
|
SV
|
DNA repair assays
|
Lecture T/R Pre-Lab W/F Pre-Lab Final Mod 1 Abstract and Summary Due
|
2
|
7
|
Tue/Wed Apr 8/9
|
LS
|
SV
|
Data analysis
|
lab quiz Lecture T/R Pre-Lab W/F Pre-Lab
|
3
|
1
|
Thur/Fri Apr 10/11
|
ANS
|
RKA
|
Design experiment
|
Lecture T/R Pre-Lab W/F Pre-Lab
|
3
|
2
|
Tue/Wed Apr 15/16
|
ANS
|
RKA
|
Initiate cell culture
|
lab quiz Lecture
|
3
|
3
|
Thur/Fri Apr 17/18
|
ANS
|
RKA
|
Testing cell viability
|
Lecture
|
|
|
Patriot's Day April 21-22
|
No lab Apr 22 or Apr 23 Mod 2 Report Due
|
|
|
3
|
4
|
Thu/Fri Apr 24/25
|
ANS
|
RKA
|
Preparing cells for analysis
|
lab quiz Lecture T/R Pre-Lab W/F Pre-Lab
|
|
|
Tue/Wed Apr 29/30
|
|
|
|
No lecture or lab today.
|
3
|
5
|
Thur/Fri May 1/2
|
ANS
|
RKA
|
Initiating transcript and protein assays
|
Lecture T/R Pre-Lab W/F Pre-Lab
|
3
|
6
|
Tue/Wed May 6/7
|
ANS
|
RKA
|
Transcript-level analysis
|
lab quiz Lecture T/R Pre-Lab W/F Pre-Lab
|
3
|
7
|
Thur/Fri May 8/9
|
ANS
|
RKA
|
Protein-level and wrap-up analysis
|
Mod 3 Mini-report Due T/R Pre-Lab W/F Pre-Lab
|
3
|
8
|
Tue/Wed May 13/14
|
ANS
|
RKA
|
Student presentations
|
|
|
|
|
Thur May 15
|
|
|
No lab session. Meet in 16-220 from 11am-1pm: feedback/discussion about class, then celebratory lunch etc.
|
|