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HughesLab:JTK Cycle: Difference between revisions
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JTK_Cycle is a non-parametric algorithm developed in collaboration with [http://scholar.google.com/citations?user=1hw5bX4AAAAJ&hl=en Professor Karl Kornacker], Ohio State University, and [http://bioinf.itmat.upenn.edu/hogeneschlab/index.php Professor John Hogenesch], University of Pennsylvania School of Medicine. Its purpose is to identify rhythmic components in large, genome-scale | JTK_Cycle is a non-parametric algorithm developed in collaboration with [http://scholar.google.com/citations?user=1hw5bX4AAAAJ&hl=en Professor Karl Kornacker], Ohio State University, and [http://bioinf.itmat.upenn.edu/hogeneschlab/index.php Professor John Hogenesch], University of Pennsylvania School of Medicine. Its purpose is to identify rhythmic components in large, genome-scale | ||
data sets, and estimate their period length, phase, and amplitude.</p> | |||
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JTK_Cycle runs in [http://en.wikipedia.org/wiki/R_%28programming_language%29 R], a statistical language that can be downloaded [http://www.r-project.org/ here]. | JTK_Cycle runs in [http://en.wikipedia.org/wiki/R_%28programming_language%29 R], a statistical language that can be downloaded [http://www.r-project.org/ here]. The scripts necessary to run JTK_Cycle are available as a .zip: [[Image:JTK_Cycle.zip]]. This compressed file also contains a User's Guide and several example data sets. | ||
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