User contributions for Chayne

15 June 2007

• 22:2722:27, 15 June 2007 diff hist +29 User:Chayne →Undergraduate current
• 22:0222:02, 15 June 2007 diff hist +13 BMCB625:Class Postmortem →Pot-luck style "late-lunch"/Dinner Option
• 22:0122:01, 15 June 2007 diff hist +9 BMCB625:Class Postmortem →Yes, can attend

14 June 2007

• 16:3116:31, 14 June 2007 diff hist +46 BMCB625:Materials →Jeremy-Bonus Materials
• 00:1900:19, 14 June 2007 diff hist +356 BMCB625:Topo →Chayne

13 June 2007

• 23:3423:34, 13 June 2007 diff hist +34 BMCB625:pol-Y (Excision Repair) →Chayne
• 23:3223:32, 13 June 2007 diff hist −1 BMCB625:pol-Y (Excision Repair) →Chayne
• 23:3023:30, 13 June 2007 diff hist +64 BMCB625:Materials →Larry-Bonus Materials
• 23:2723:27, 13 June 2007 diff hist +1,048 BMCB625:pol-Y (Excision Repair) →Chayne
• 06:4006:40, 13 June 2007 diff hist +1,050 BMCB625:ncRNA →Chayne
• 04:5004:50, 13 June 2007 diff hist +775 BMCB625:Noncoding Y RNA →Chayne

12 June 2007

• 06:3806:38, 12 June 2007 diff hist −16 BMCB625:Materials →Jeremy-Bonus Materials
• 05:5805:58, 12 June 2007 diff hist +96 BMCB625:Materials →Jeremy-Bonus Materials
• 00:4700:47, 12 June 2007 diff hist −108 BMCB625:pdb analysis No edit summary current
• 00:4600:46, 12 June 2007 diff hist +255 BMCB625:pdb analysis No edit summary

10 June 2007

• 21:0321:03, 10 June 2007 diff hist +124 BMCB625:Materials No edit summary
• 20:5820:58, 10 June 2007 diff hist 0 N File:Bcmb625-7jun07-DNAGyrase-piscitelli.ppt No edit summary current

9 June 2007

• 20:1520:15, 9 June 2007 diff hist −348 User:Chayne No edit summary
• 20:0820:08, 9 June 2007 diff hist 0 N File:LeuT-crystals1.jpg No edit summary current
• 20:0720:07, 9 June 2007 diff hist 0 N File:Squamish BC-MtBiking1-small.jpg No edit summary current
• 17:2517:25, 9 June 2007 diff hist +352 BMCB625:pdb analysis No edit summary
• 17:1817:18, 9 June 2007 diff hist +17 BMCB625:Materials No edit summary

8 June 2007

• 22:2422:24, 8 June 2007 diff hist +226 BMCB625:Materials No edit summary
• 21:4921:49, 8 June 2007 diff hist +51 BMCB625:pdb analysis No edit summary
• 21:2821:28, 8 June 2007 diff hist +5,778 N BMCB625:pdb analysis New page: {{Template:BMCB625}} <div style="padding: 10px; width: 720px; border: 5px solid #B3CD4E;"> === How to take a deeper look into a crystal structure, the first steps === The structure may l...
• 18:3918:39, 8 June 2007 diff hist +106 BMCB625:Materials No edit summary
• 18:2418:24, 8 June 2007 diff hist +303 BMCB625:Materials No edit summary

6 June 2007

• 08:5608:56, 6 June 2007 diff hist +86 BMCB625:Materials →Chayne - Bonus Materials
• 08:3108:31, 6 June 2007 diff hist +156 BMCB625:Materials →Chayne - Bonus Materials
• 08:0908:09, 6 June 2007 diff hist +263 N BMCB625:DNA Gyrase New page: {{Template:BMCB625}} <div style="padding: 10px; width: 720px; border: 5px solid #B3CD4E;"> ==Discussion/Homework Questions== ===Mahta=== ---- ===Larry=== ---- ===Jon=== ---- ===Jer...
• 08:0608:06, 6 June 2007 diff hist −4 BMCB625:Schedule →Week-by-Week Schedule Summary

25 May 2007

• 17:3617:36, 25 May 2007 diff hist +197 BMCB625:Materials No edit summary

23 May 2007

• 07:4307:43, 23 May 2007 diff hist +45 BMCB625:Helicases →Chayne
• 07:4007:40, 23 May 2007 diff hist +131 N File:Fig2-2GXA-loop-superpose.pdf figure showing progressive shift in position of DNA binding loops from PDB 2GXA. superposed oligomerization domains c. piscitelli current
• 07:3507:35, 23 May 2007 diff hist +241 BMCB625:Helicases →Chayne
• 07:3407:34, 23 May 2007 diff hist +49 N File:Fig7-ADP bs-lsqall-view2.png same as fig6, different orientation c. piscitelli current
• 07:3407:34, 23 May 2007 diff hist +197 N File:Fig6-ADP bs-lsqall.png comparison of all ADP binding sites at all interfaces in hexamer. reveals two distinct modes for ATP-like and ADP-like and lone Apo-like state. orientation same as in figs 3, 4 and 5 c. piscitelli current
• 07:3107:31, 23 May 2007 diff hist +100 N File:Fig5-ADP bs-lsqF-APOlike.png Apo-like ADP binding site at interface of chains F,A same orientation as fig3 and fig4 c. piscitelli current
• 07:2907:29, 23 May 2007 diff hist +110 N File:Fig4-ADP bs-lsqABC-ATPlike.png comparison of ATP-like(!) interfaces between chains A,B and B,C and C,D same orientation as fig3 c. piscitelli current
• 07:2507:25, 23 May 2007 diff hist +138 N File:Fig3-ADP bs-lsqDE-ADPlike.png comparison of ADP binding at the interfaces between chains D, E and E, F (ADP-like state) from pdb 2XGA oligomerization domains superposed current
• 07:2207:22, 23 May 2007 diff hist +129 N File:Fig2-2XGA-loop-superpose.pdf figure showing progressive shift in position of DNA binding loops from PDB 2XGA. superposed oligomerization domains c. piscitelli current
• 07:1807:18, 23 May 2007 diff hist +301 BMCB625:Helicases →Chayne
• 07:1607:16, 23 May 2007 diff hist +49 N File:Fig1-2GXA-lattice.png lattice packing for 2XGA structure -c. piscitelli current

14 May 2007

• 19:5719:57, 14 May 2007 diff hist +78 BMCB625:Materials →Bonus Materials
• 19:5419:54, 14 May 2007 diff hist −34 BMCB625:Materials Undo revision 116499 by Special:Contributions/Chayne (User talk:Chayne)
• 19:5019:50, 14 May 2007 diff hist +34 BMCB625:Materials →Bonus Materials
• 19:4119:41, 14 May 2007 diff hist +239 BMCB625:Nucleosome Coding →Jon
• 02:3902:39, 14 May 2007 diff hist +50 BMCB625:Nucleosome Coding →Chayne
• 02:3902:39, 14 May 2007 diff hist +2,720 BMCB625:Nucleosome Coding →Chayne

13 May 2007

• 23:4123:41, 13 May 2007 diff hist +416 BMCB625:Discussion →Suggestions about how the run the next term