Difference between revisions of "Xenopus Community"

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(Xen wiki on OWW or on XenBase server?)
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'''Advantages to hosting XenWiki on OWW'''
 
'''Advantages to hosting XenWiki on OWW'''
*[[http://openwetware.org/wiki/OpenWetWare:Why_join%3F general reasons to join OWW]]  
+
*[[OpenWetWare:Why join?|general reasons to join OWW]]  
 
# Broader involvement with the non-Xenopus scientific community
 
# Broader involvement with the non-Xenopus scientific community
 
#Xen Labs will learn about other work going on in OWW labs, esp. Synthetic Biology  
 
#Xen Labs will learn about other work going on in OWW labs, esp. Synthetic Biology  
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#very interactive scientists with many interests are managing the OWW site  
 
#very interactive scientists with many interests are managing the OWW site  
 
#learning curve for wikitricks (editing, etc)  is very good because of all the help and organization on OWW. This will help new XenLabs get wikified.
 
#learning curve for wikitricks (editing, etc)  is very good because of all the help and organization on OWW. This will help new XenLabs get wikified.
 +
#don't have to cope with administrative and technical overhead of setting up/maintaining the software and hardware to run the wiki
 +
#backed up every day -> moving to server with redundant hardware, diesel power backup, multiple server uplinks to internet, 1 hr hardware replacement guarantee, 24hr monitoring... et cetera
 +
#it does not hurt to try, and then move your wiki later. As long as you are using mediawiki (by far the largest wiki distribution), you can always move pages later.  It really is just copying and pasting code.  In fact, we could probably export the whole lot for you. 
  
 
'''Advantages to hosting XenWiki through the [[http://www.xenbase.org/ XenBase]] server'''
 
'''Advantages to hosting XenWiki through the [[http://www.xenbase.org/ XenBase]] server'''
 
#direct links possible between Xenwiki and XenBase areas
 
#direct links possible between Xenwiki and XenBase areas
 +
#*this is possible (and probably easier) on OWW as we have experience with other databases (BioBricks), and could probably easily modify it to contain your information. 
 
#control
 
#control
 +
#private spaces -> one could implement a scheme (not technically possible yet, but could be programmed in) where individual pages have different rights.  Essentially, giving users the ability to place read/write controls on data.
  
 
==What should be on this wiki vs what is already on JGI and XenBase==
 
==What should be on this wiki vs what is already on JGI and XenBase==
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==Other==
 
==Other==
 
*[http://www.frogstore.com/home.php The Frog Store] Isn't the internet wonderful?
 
*[http://www.frogstore.com/home.php The Frog Store] Isn't the internet wonderful?
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<wikionly>
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<font size=4>'''Recent changes'''</font>{{Special:Recentchanges/Xenopus Community}}
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</wikionly>

Latest revision as of 19:31, 17 June 2008

Hoatlin frogs.jpg

XenCommunity

Under Construction. Edits and suggestions welcome.

Discussion about having XenWiki on OWW or hosted at [XenBase]

  • XenBase could set up and host a wiki for the Xen Community on its new server, or the XenWiki could be here on OWW. I justed added a few thoughts.

Advantages to hosting XenWiki on OWW

  1. Broader involvement with the non-Xenopus scientific community
  2. Xen Labs will learn about other work going on in OWW labs, esp. Synthetic Biology
  3. OWW has a lab-tweaked mediawiki
  4. very interactive scientists with many interests are managing the OWW site
  5. learning curve for wikitricks (editing, etc) is very good because of all the help and organization on OWW. This will help new XenLabs get wikified.
  6. don't have to cope with administrative and technical overhead of setting up/maintaining the software and hardware to run the wiki
  7. backed up every day -> moving to server with redundant hardware, diesel power backup, multiple server uplinks to internet, 1 hr hardware replacement guarantee, 24hr monitoring... et cetera
  8. it does not hurt to try, and then move your wiki later. As long as you are using mediawiki (by far the largest wiki distribution), you can always move pages later. It really is just copying and pasting code. In fact, we could probably export the whole lot for you.

Advantages to hosting XenWiki through the [XenBase] server

  1. direct links possible between Xenwiki and XenBase areas
    • this is possible (and probably easier) on OWW as we have experience with other databases (BioBricks), and could probably easily modify it to contain your information.
  2. control
  3. private spaces -> one could implement a scheme (not technically possible yet, but could be programmed in) where individual pages have different rights. Essentially, giving users the ability to place read/write controls on data.

What should be on this wiki vs what is already on JGI and XenBase

Discuss and decide what we need so we can ask NIH, get involved with NIH "report" recommendations

  • notes from 11th Xen Meeting: Instructions for submitting a proposal NHGRC: see 'white paper' instructions on web site (need the link)
  • program announcement due Jan 18 2007, document on web site but applications that do the best produce a resource for the community and also do good science, US labs and non-US labs are considered.

Next Meeting

  • will be in Germany, details TBA
  • contact committee for ideas for next meeting


Collected from Bruce Blumberg's excellent Xine

Xine in html format, back issues

Links to useful sources of information for Xenopus (in no particular order) general interest and utility

Genomic resources

Other

<wikionly>

Recent changes

20 May 2018

     14:22  Hoatlin:BMB seminar series 2017-2018‎ (diff | hist) . . (+72). . Maureen E. Hoatlin (talk | contribs) (Seminar Series Planning 2018-2019)
     08:06  Lee:JC‎ (diff | hist) . . (-42). . Wooin Lee (talk | contribs) (2018)

19 May 2018

     11:47 (User creation log) . . User account Yaning (talk | contribs) was created by Yar (talk | contribs) and password was sent by email ‎

18 May 2018

     20:02 

User:David S LeBauer‎‎ (3 changes | history) . . (-1,044). . [David S LeBauer‎ (3×)]

     

20:02

(cur | prev) . . (-13). . David S LeBauer (talk | contribs) (I've moved my home page: https://davidlebauer.com)

     

20:02

(cur | prev) . . (-22). . David S LeBauer (talk | contribs)

     

20:02

(cur | prev) . . (-1,009). . David S LeBauer (talk | contribs) (Replaced content with "{{Template:DLeBauer}} ==I've moved my home page: https://davidlebauer.com ==")

     15:00  Endy:Stanford Lab Meetings‎ (diff | hist) . . (+37). . Reicker1 (talk | contribs) (Endy Lab Meetings Spring 2018)

     14:52 

Beauchamp:Orientation‎‎ (3 changes | history) . . (-51). . [Michael S Beauchamp‎ (3×)]

     

14:52

(cur | prev) . . (-20). . Michael S Beauchamp (talk | contribs)

     

14:52

(cur | prev) . . (-1). . Michael S Beauchamp (talk | contribs)

     

14:52

(cur | prev) . . (-30). . Michael S Beauchamp (talk | contribs)

     13:37 (User creation log) . . User account Netnapa (talk | contribs) was created by Yar (talk | contribs) and password was sent by email ‎

N    12:15 

Beauchamp:RestingState‎‎ (23 changes | history) . . (+18,752). . [Meghanr‎ (23×)]

     

12:15

(cur | prev) . . (+1,207). . Meghanr (talk | contribs) (Seed-based approach)

     

11:47

(cur | prev) . . (+1,229). . Meghanr (talk | contribs) (Example afni_proc.py script - some reasonable choices for noise regression)

     

11:36

(cur | prev) . . (+67). . Meghanr (talk | contribs) (Example afni_proc.py script - some reasonable choices for noise regression)

     

11:36

(cur | prev) . . (+139). . Meghanr (talk | contribs) (Example afni_proc.py script - some reasonable choices for noise regression)

     

11:34

(cur | prev) . . (+262). . Meghanr (talk | contribs) (Overall approach)

     

11:04

(cur | prev) . . (-5). . Meghanr (talk | contribs) (Seed-based approach)

     

09:52

(cur | prev) . . (+43). . Meghanr (talk | contribs) (Seed-based approach)

     

09:51

(cur | prev) . . (+981). . Meghanr (talk | contribs) (Example afni_proc.py script - some reasonable choices for noise regression)

     

09:44

(cur | prev) . . (+685). . Meghanr (talk | contribs) (Seed-based approach)

     

09:36

(cur | prev) . . (+23). . Meghanr (talk | contribs)

     

09:32

(cur | prev) . . (+1,029). . Meghanr (talk | contribs) (Quick QA)

     

09:27

(cur | prev) . . (+1,589). . Meghanr (talk | contribs) (Quick QA)

     

09:16

(cur | prev) . . (+36). . Meghanr (talk | contribs) (Quick QA)

     

09:04

(cur | prev) . . (+296). . Meghanr (talk | contribs) (Quick QA)

     

08:55

(cur | prev) . . (+173). . Meghanr (talk | contribs) (Quick QA)

     

08:54

(cur | prev) . . (+2,217). . Meghanr (talk | contribs)

     

08:36

(cur | prev) . . (+2,373). . Meghanr (talk | contribs)

     

08:05

(cur | prev) . . (+1,439). . Meghanr (talk | contribs)

     

07:55

(cur | prev) . . (+441). . Meghanr (talk | contribs)

     

07:50

(cur | prev) . . (+553). . Meghanr (talk | contribs) (Overall approach)

     

07:46

(cur | prev) . . (+798). . Meghanr (talk | contribs)

     

07:37

(cur | prev) . . (+195). . Meghanr (talk | contribs)

N    

07:32

(cur | prev) . . (+2,982). . Meghanr (talk | contribs) (Created page with "{{Beauchamp Lab Notebook Navigation Bar}} <br> <div style="padding: 8px; color: #000000; background-color: #ffffff; width: 730px; border: 2px solid #666666;"> === How to acqu...")

     11:27 

Beauchamp:Lab Notebook‎‎ (2 changes | history) . . (+50). . [Meghanr‎ (2×)]

     

11:27

(cur | prev) . . (-6). . Meghanr (talk | contribs)

     

07:07

(cur | prev) . . (+56). . Meghanr (talk | contribs) (Experimental Design and Analysis)

     09:35 

(Upload log). .

[Meghanr‎ (8×)]

     

09:35

. . Meghanr (talk | contribs) uploaded File:Instacorr screenshot 07.jpg

     

09:35

. . Meghanr (talk | contribs) uploaded File:Instacorr screenshot 06.jpg

     

09:35

. . Meghanr (talk | contribs) uploaded File:Instacorr screenshot 05.jpg

     

09:34

. . Meghanr (talk | contribs) uploaded File:Instacorr screenshot 04.jpg

     

09:33

. . Meghanr (talk | contribs) uploaded File:Instacorr screenshot 03.jpg

     

09:32

. . Meghanr (talk | contribs) uploaded File:Instacorr screenshot 02.jpg

     

09:19

. . Meghanr (talk | contribs) uploaded a new version of File:Instacorr screenshot 01.jpg

     

09:17

. . Meghanr (talk | contribs) uploaded File:Instacorr screenshot 01.jpg

17 May 2018

     20:24 

Sangdunchoi:Papers‎‎ (6 changes | history) . . (-122). . [Mahesh Chandra Patra‎ (6×)]

     

20:24

(cur | prev) . . (-114). . Mahesh Chandra Patra (talk | contribs) (2018)

     

20:23

(cur | prev) . . (-9). . Mahesh Chandra Patra (talk | contribs) (2018)

     

20:22

(cur | prev) . . (-1). . Mahesh Chandra Patra (talk | contribs) (2018)

     

20:22

(cur | prev) . . (+2). . Mahesh Chandra Patra (talk | contribs) (2018)

     

20:21

(cur | prev) . . (0). . Mahesh Chandra Patra (talk | contribs) (2018)

     

20:21

(cur | prev) . . (0). . Mahesh Chandra Patra (talk | contribs) (2018)

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