Schumer lab:Wet lab/Sequencing

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Contents

  • 1 Sanger sequencing resources
  • 2 Pyrosequencing resources
  • 3 RNA extraction and Reverse Transcription
  • 4 qPCR
  • 5 low coverage whole genome sequencing resources
  • 6 Illumina sequencing resources
  • 7 HMW DNA Extractions
  • 8 Cell culture

Sanger sequencing resources

  • Primer design
  • Sanger sequencing

Pyrosequencing resources

  • Pyrosequencing primer design
  • Pyrosequencing primer ordering
  • Pyrosequencing at Stanford

RNA extraction and Reverse Transcription

  • RNA extraction
  • Reverse Transcription

qPCR

  • Primer efficiency testing
  • Data collection

low coverage whole genome sequencing resources

  • DNA extraction
  • DNA quantification and dilution
  • Library Prep

Illumina sequencing resources

  • Which indices should I use?
  • Pooling libraries for sequencing
  • Submitting libraries for sequencing

HMW DNA Extractions

  • NEB Monarch Tissue HMW DNA extraction

Cell culture

  • Changing media
  • Passaging cells
  • Electroporation
  • HSV transduction
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  • This page was last edited on 12 February 2025, at 20:40.
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