T7 Feature Conservation

Conserved genomic features across T7 and close relatives

The table below shows conservation data for genes, promoters and RNAse III sites, across 5 genomes: T7, T3, gh-1, φYeO3-12 and φA1122.

	Genomes
Genes
gene=0.3	T7	phiYe03-12	T3	phiA1122	------
gene=0.3b	------	------	T3	------	------
gene=0.4	T7	------	------	------	------
gene=0.45	------	phiYe03-12	------	------	------
gene=0.5	T7	------	------	------	------
gene=0.6	------	------	T3	------	------
gene=0.65	------	------	T3	------	------
gene=0.6a	T7	phiYe03-12	------	------	------
gene=0.6b	T7	phiYe03-12	------	------	------
gene=0.7	T7	phiYe03-12	T3	phiA1122	------
gene=1	T7	phiYe03-12	T3	phiA1122	gh-1
gene=1.05	------	phiYe03-12	T3	------	------
gene=1.1	T7	phiYe03-12	T3	phiA1122	gh-1
gene=orf1	------	------	------	------	gh-1
gene=orf2	------	------	------	------	gh-1
gene=1.2	T7	phiYe03-12	T3	phiA1122	------
gene=1.3	T7	phiYe03-12	T3	phiA1122	gh-1
gene=orf3A	------	------	------	------	gh-1
gene=orf3B	------	------	------	------	gh-1
gene=1.4	T7	------	------	------	------
gene=1.45	------	phiYe03-12	------	------	------
gene=1.5	T7	phiYe03-12	T3	phiA1122	------
gene=1.6	T7	phiYe03-12	T3	phiA1122	------
gene=1.7	T7	phiYe03-12	T3	phiA1122	------
gene=1.75	------	------	------	phiA1122	------
gene=1.8	T7	phiYe03-12	T3	phiA1122	------
gene=1.9	------	------	T3	------	------
gene=1.95	------	------	T3	------	------
gene=2	T7	phiYe03-12	T3	phiA1122	gh-1
gene=orf4					gh-1
gene=2.5	T7	phiYe03-12	T3	phiA1122	gh-1
gene=2.8	T7	------	------	------	------
gene=3	T7	phiYe03-12	T3	phiA1122	gh-1
gene=3.3	------	------	------	phiA1122	------
gene=3.5	T7	phiYe03-12	T3	phiA1122	gh-1
gene=orf5	------	------	------	------	gh-1
gene=3.7	------	phiYe03-12	T3	------	------
gene=3.8	T7	------	------	phiA1122	gh-1
gene=4	------	------	T3	------	gh-1
gene=orf6	------	------	------	------	gh-1
gene=orf7	------	------	------	------	gh-1
gene=4.1	T7	------	------	------	------
gene=4.15	------	phiYe03-12	------	------	------
gene=4.2	T7	phiYe03-12	T3	------	------
gene=4.3	T7	phiYe03-12	T3	phiA1122	------
gene=4.5	T7	phiYe03-12	T3	phiA1122	------
gene=4.7	T7	------	------	phiA1122	------
gene=4a	T7	phiYe03-12	T3	phiA1122	------
gene=4b	T7	phiYe03-12	T3	phiA1122	------
gene=5	T7	phiYe03-12	T3	phiA1122	gh-1
gene=orf8	------	------	------	------	gh-1
gene=5.1	------	------	T3	------	------
gene=5.3	T7	phiYe03-12	T3	------	------
gene=5.5	T7	phiYe03-12	T3	phiA1122	------
gene=5.5-5.7	T7	phiYe03-12	------	------	------
gene=5.7	T7	phiYe03-12	T3	phiA1122	gh-1
gene=5.9	T7	phiYe03-12	T3	phiA1122	------
gene=5b	------	phiYe03-12	T3	------	------
gene=6	T7	phiYe03-12	T3	phiA1122	gh-1
gene=6.1	------	phiYe03-12	------	------	------
gene=6.3	T7	phiYe03-12	T3	phiA1122	------
gene=6.5	T7	phiYe03-12	T3	phiA1122	gh-1
gene=6.7	T7	phiYe03-12	T3	phiA1122	gh-1
gene=7	T7	------	------	phiA1122	gh-1
gene=7.3	T7	phiYe03-12	T3	phiA1122	gh-1
gene=7.7	T7	------	------	phiA1122	------
gene=8	T7	phiYe03-12	T3	phiA1122	gh-1
gene=9	T7	phiYe03-12	T3	phiA1122	gh-1
gene=10a	T7	phiYe03-12	T3	phiA1122	gh-1
gene=10b	T7	phiYe03-12	T3	------	------
gene=11	T7	phiYe03-12	T3	phiA1122	gh-1
gene=12	T7	phiYe03-12	T3	phiA1122	gh-1
gene=13	T7	phiYe03-12	T3	phiA1122	gh-1
gene=13.5	------	phiYe03-12	------	------	------
gene=14	T7	phiYe03-12	T3	phiA1122	gh-1
gene=15	T7	phiYe03-12	T3	phiA1122	gh-1
gene=16	T7	phiYe03-12	T3	phiA1122	gh-1
gene=17	T7	phiYe03-12	T3	phiA1122	gh
gene=orf9	------	------	------	------	gh-1
gene=17.5	T7	phiYe03-12	T3	phiA1122	------
gene=18	T7	phiYe03-12	T3	phiA1122	gh-1
gene=18.5	T7	phiYe03-12	T3	phiA1122	gh-1
gene=18.7	T7	phiYe03-12	T3	phiA1122	gh-1
gene=19	T7	phiYe03-12	T3	phiA1122	gh-1
gene=orf10	------	------	------	------	gh-1
gene=orf11	------	------	------	------	gh-1
gene=19.2	T7	phiYe03-12	T3	phiA1122	------
gene=19.3	T7	phiYe03-12	T3	phiA1122	------
gene=19.5	T7	phiYe03-12	T3	phiA1122	------
Promoters
promoter=A0	T7	phiYe03-12	T3	phiA1122	------
promoter=A1	T7	phiYe03-12	T3	phiA1122	gh-1
promoter=A2	T7	phiYe03-12	T3	phiA1122	gh-1
promoter=A3	T7	phiYe03-12	T3	phiA1122	------
promoter=B	T7	------	T3	------	------
promoter=C	T7	------	T3	phiA1122	------
promoter=phi1	------	------	------	------	gh-1
promoter=phiorf3A	------	------	------	------	gh-1
promoter=phi1.05	------	phiYe03-12	T3	------	------
promoter=phi1.1	------	phiYe03-12	T3	------	------
promoter=phi1.1a	T7	------	------	phiA1122	------
promoter=phi1.1b	T7	------	------	phiA1122	------
promoter=phi1.3	T7	phiYe03-12	T3	phiA1122	------
promoter=phi1.5	T7	phiYe03-12	T3	phiA1122	------
promoter=phi1.6	T7	------	------	phiA1122	------
promoter=phi2.5	T7	phiYe03-12	T3	phiA1122	gh-1
promoter=phi3.8	T7	phiYe03-12	T3	phiA1122	------
promoter=phi4.3	T7	phiYe03-12	T3	phiA1122	------
promoter=phi4.7	T7	------	------	phiA1122	------
promoter=phi4c	T7	------	------	phiA1122	------
promoter=phi5	------	------	------	------	gh-1
promoter=phi6.5	T7	phiYe03-12	T3	phiA1122	gh-1
promoter=phi9	T7	phiYe03-12	T3	phiA1122	gh-1
promoter=phi10	T7	phiYe03-12	T3	phiA1122	gh-1
promoter=phi11	------	phiYe03-12	T3	------	------
promoter=phi13	T7	phiYe03-12	T3	phiA1122	gh-1
promoter=phi17	T7	phiYe03-12	------	phiA1122	gh-1
promoter=phiorf10	------	------	------	------	gh-1
promoter=phiOL	T7	phiYe03-12	T3	phiA1122	------
promoter=phiOR	T7	phiYe03-12	T3	------	------
Rnase III sites
RNAseIII=r0.3	T7	phiYe03-12	T3	phiA1122	------
RNAseIII=r0.45	------	phiYe03-12	------	------	------
RNAseIII=r0.5	T7	------	T3	------	------
RNAseIII=r1	T7	phiYe03-12	T3	phiA1122	gh-1
RNAseIII=r1.1	T7	phiYe03-12	T3	phiA1122	------
RNAseIII=r1.3	T7	phiYe03-12	T3	phiA1122	------
RNAseIII=r3.8	T7	phiYe03-12	T3	phiA1122	------
RNAseIII=r4.7	T7	phiYe03-12	T3	phiA1122	------
RNAseIII=r6.5	T7	phiYe03-12	T3	phiA1122	------
RNAseIII=r13	T7	phiYe03-12	T3	phiA1122	------
RNAseIII=r18.5	T7	phiYe03-12	T3	phiA1122	------