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==Procedure== | ==Procedure== | ||
Add 5μL Proteinase K to each mL of Digestion Buffer | #Add 5μL Proteinase K to each mL of Digestion Buffer | ||
Homogenise (or simply place) tissue in solution | #Homogenise (or simply place) tissue in solution | ||
Incubate at 55°C for 1 hour to overnight | #Incubate at 55°C for 1 hour to overnight | ||
#Centrifuge at maximum speed in a benchtop centrifuge for 2 minutes | |||
Centrifuge at maximum speed in a benchtop centrifuge for 2 minutes | #Transfer supernatant into a new tube | ||
Transfer supernatant into a new tube | #Add 1/10 volume of Sodium Acetate 3M (pH5.2) | ||
Add 1/10 volume of Sodium Acetate 3M (pH5.2) | #Invert to mix and incubate at -20°C for ~30 minutes | ||
Invert to mix and incubate at -20°C for ~30 minutes | #Centrifuge (preferably at 4°C) at maximum speed in a benchtop centrifuge for 20 minutes | ||
Centrifuge (preferably at 4°C) at maximum speed in a benchtop centrifuge for 20 minutes | #Transfer supernatant to a new tube | ||
Transfer supernatant to a new tube | #Add >2 volumes of 98% ethanol | ||
Add >2 volumes of 98% ethanol | #Invert to mix and incubate at -20°C for 30 minutes | ||
Invert to mix and incubate at -20°C for 30 minutes | #Centrifuge (preferably at 4°C) at maximum speed in a benchtop centrifuge for 20 minutes | ||
Centrifuge (preferably at 4°C) at maximum speed in a benchtop centrifuge for 20 minutes | #Wash pellet with 70% ethanol, dry and resuspend in water or TE | ||
Wash pellet with 70% ethanol, dry and resuspend in water or TE | |||
==Critical steps== | ==Critical steps== | ||
After adding sodium acetate and centrifuging be careful not to transfer any of the white solid (SDS) into the fresh tube | #After adding sodium acetate and centrifuging be careful not to transfer any of the white solid (SDS) into the fresh tube | ||
#Ensure to dry the pelletted DNA completely before attempting to resuspend | |||
Ensure to dry the pelletted DNA completely before attempting to resuspend | |||
==Troubleshooting== | ==Troubleshooting== | ||
==Notes== | ==Notes== | ||
This protocol has evolved with me and I am sure many others, please share your optimisations. | #This protocol has evolved with me and I am sure many others, please share your optimisations. | ||
#You may wish to kill the Proteinase K (95°C, 10 minutes) after the extraction though if you are proceding straight to PCR (and don't leave your reactions sitting around before thermal cycling) the denaturation step will take care of that | |||
You may wish to kill the Proteinase K (95°C, 10 minutes) after the extraction though if you are proceding straight to PCR (and don't leave your reactions sitting around before thermal cycling) the denaturation step will take care of that | |||
==Acknowledgments== | ==Acknowledgments== | ||
#Damien Broderick from Queensland Depaqrtment of Primary Industries and Fisheries supplied me with his version of this protocol to start me off. | |||
Damien Broderick from Queensland Depaqrtment of Primary Industries and Fisheries supplied me with his version of this protocol to start me off. | |||
==References== | ==References== |
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