User contributions for RCharalel
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3 May 2007
- 13:4413:44, 3 May 2007 diff hist −2 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-5-3 →Documentation current
- 13:4413:44, 3 May 2007 diff hist +2,493 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-5-3 No edit summary
- 06:0706:07, 3 May 2007 diff hist +280 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-5-3 →Progress
- 05:5605:56, 3 May 2007 diff hist +583 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-5-3 No edit summary
- 05:4205:42, 3 May 2007 diff hist +150 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-5-3 →Code
- 05:3905:39, 3 May 2007 diff hist +4,187 N Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-5-3 New page: ==Annotation== *The following code combines the work that both Cynthia and I have done to return mesh terms (all mesh terms as well as just the major mesh terms) that are derived from two ...
1 May 2007
- 04:4004:40, 1 May 2007 diff hist +148 Harvard:Biophysics 101/2007/04/26 No edit summary
- 04:3804:38, 1 May 2007 diff hist −1 User:RCharalel →Biophysics 101 current
- 04:3704:37, 1 May 2007 diff hist +1 User:RCharalel →Biophysics 101
- 04:3604:36, 1 May 2007 diff hist −1 User:RCharalel →Biophysics 101
- 04:3504:35, 1 May 2007 diff hist +152 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-5-1 →Update current
- 04:3404:34, 1 May 2007 diff hist +4 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-5-1 →Update
- 04:3404:34, 1 May 2007 diff hist +5,822 N Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-5-1 New page: ==Update== *I have been out of town since last Thursday's class for a revisit weekend and did not have email/computer access there. So, unfortunately, I did not get as much to work on thi...
- 04:0504:05, 1 May 2007 diff hist +159 Harvard:Biophysics 101/2007/04/26 No edit summary
26 April 2007
- 03:4503:45, 26 April 2007 diff hist +4,365 N Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-26 New page: ==Comments== *I think I now have all of the necessary pieces of code to create a program, which will parse the XML of any returned OMIM entry to retrieve the PMIDs, then search these throu... current
- 03:4103:41, 26 April 2007 diff hist +74 Harvard:Biophysics 101/2007/04/19 No edit summary
24 April 2007
- 04:3604:36, 24 April 2007 diff hist +89 Harvard:Biophysics 101/2007/04/19 No edit summary
- 04:3504:35, 24 April 2007 diff hist +3,893 N Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-24 New page: ==Tasks Accomplished== *Grasped a much better understanding of XML parsing. *Finished code to parse OMIM records and return all Pubmed ID numbers (without errors). *Wrote code to search Pu... current
- 04:2704:27, 24 April 2007 diff hist +90 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-19 →Tasks for Tuesday and Thursday current
- 04:2604:26, 24 April 2007 diff hist 0 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-19 →Program So Far
- 04:2504:25, 24 April 2007 diff hist +8 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-19 →Program So Far
- 04:2504:25, 24 April 2007 diff hist +310 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-19 No edit summary
- 04:2204:22, 24 April 2007 diff hist 0 Harvard:Biophysics 101/2007/04/19 No edit summary
- 04:2104:21, 24 April 2007 diff hist +171 Harvard:Biophysics 101/2007/04/19 No edit summary
19 April 2007
- 02:1902:19, 19 April 2007 diff hist +294 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-19 →Issues
- 02:1602:16, 19 April 2007 diff hist +881 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-19 →Issues
- 02:0002:00, 19 April 2007 diff hist +150 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-13 →What I Plan to Contribute current
- 02:0002:00, 19 April 2007 diff hist +288 N Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-19 New page: ==Issues== *I think I have an appropriate algorithm for deriving keywords and printing some PMIDs. However, I keep getting this weird error message that says my spacing is incorrect and w...
17 April 2007
- 04:3404:34, 17 April 2007 diff hist +387 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-13 →Notes
- 04:1004:10, 17 April 2007 diff hist +265 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-13 →What I Plan to Contribute
- 04:0704:07, 17 April 2007 diff hist +9 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-17 No edit summary current
- 04:0604:06, 17 April 2007 diff hist +2,195 N Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-17 New page: Applications: Our program can be used for a variety of applications. In particular, it is able to locate single nucleotide polymorphisms (SNPs) in an entered DNA sequence and return any...
13 April 2007
- 20:0220:02, 13 April 2007 diff hist +5 Harvard:Biophysics 101/2007/04/12 No edit summary
- 20:0020:00, 13 April 2007 diff hist +12 Harvard:Biophysics 101/2007/04/12 No edit summary
- 19:5919:59, 13 April 2007 diff hist +56 Harvard:Biophysics 101/2007/04/12 No edit summary
- 19:5819:58, 13 April 2007 diff hist +579 N Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-13 New page: ==What I Plan to Contribute== *I am currently writing up how to use our program and separately, how it works. It is almost done and will be completed by Tuesday. *I will write code to ge...
- 19:4819:48, 13 April 2007 diff hist +8 Harvard:Biophysics 101/2007/04/10 →What we need
5 April 2007
- 15:3115:31, 5 April 2007 diff hist +112 Harvard:Biophysics 101/2007/Project →OMIM
- 15:3015:30, 5 April 2007 diff hist −1 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-5 →OMIM to Review Articles in Pubmed current
- 15:2915:29, 5 April 2007 diff hist +642 N Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-4-5 New page: ==OMIM to Review Articles in Pubmed== *The following is the code to return a list of review references for the disease returned through Xiaodi's code. <\pre> from Bio import PubMed fro...
18 March 2007
- 14:0214:02, 18 March 2007 diff hist +796 N Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-3-20 New page: ==Assignment== There are a number of steps to be taken in order to create a program that will achieve the requested functions and I think Xiaodi, Mike and Zach outline those beautifully. ... current
- 13:5413:54, 18 March 2007 diff hist +627 Harvard:Biophysics 101/2007/Notebook:Xiaodi Wu/2007-3-20 No edit summary
15 March 2007
- 03:2303:23, 15 March 2007 diff hist −11 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-3-15 →Task 2
- 03:2103:21, 15 March 2007 diff hist +13 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-3-15 →Task 2
- 03:2003:20, 15 March 2007 diff hist +13 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-3-15 →Task 2
- 03:2003:20, 15 March 2007 diff hist +2,116 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-3-15 →Task 2
- 02:5002:50, 15 March 2007 diff hist +1,394 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-3-15 →Task 1
13 March 2007
- 20:4720:47, 13 March 2007 diff hist +9 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-3-15 →Task 1
- 20:4620:46, 13 March 2007 diff hist +265 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-3-15 →Task 1
- 19:5519:55, 13 March 2007 diff hist 0 Harvard:Biophysics 101/2007/Notebook:Resmi Charalel/2007-3-15 →Task 1