User contributions for Jmenzago

30 April 2020

• 07:0207:02, 30 April 2020 diff hist +551 Jmenzago Week 14 →References: added references current
• 07:0007:00, 30 April 2020 diff hist +43 Jmenzago Week 14 →Presentation: added link to pdf
• 06:5906:59, 30 April 2020 diff hist +72 Jmenzago Week 14 →Combined Methods/Results
• 06:5906:59, 30 April 2020 diff hist +48 N File:Coronavirus Structure Research Project.pdf Final research project for BIOL368 current
• 06:5706:57, 30 April 2020 diff hist +19 Jmenzago Week 14 →Analysis of RBD Protein Sequence: added figure
• 06:5706:57, 30 April 2020 diff hist +68 Jmenzago Week 14 →Visualization of Protein Structure: added figures
• 06:5506:55, 30 April 2020 diff hist +10 Jmenzago Week 14 →Generation of Phylogenetic Tree: added figure 1
• 06:5306:53, 30 April 2020 diff hist +966 Jmenzago Week 14 →Scientific Conclusion: added conclusion
• 06:4406:44, 30 April 2020 diff hist +45 Jmenzago Week 14 →Acknowledgements: added acknowledgement for figure 6
• 06:4306:43, 30 April 2020 diff hist +712 Jmenzago Week 14 →Analysis of RBD Protein Sequence: added analysis of figure
• 06:3506:35, 30 April 2020 diff hist +170 Jmenzago Week 14 →Analysis of RBD Protein Sequence: added notes about highlights
• 06:3406:34, 30 April 2020 diff hist 0 Jmenzago Week 14 →Analysis of RBD Protein Sequence: changed x to 3
• 06:3306:33, 30 April 2020 diff hist +2 m Jmenzago Week 14 →Visualization of Protein Structure
• 06:3306:33, 30 April 2020 diff hist +1 Jmenzago Week 14 →Visualization of Protein Structure: minor structural changes
• 06:3206:32, 30 April 2020 diff hist +6 Jmenzago Week 14 →Visualization of Protein Structure: resized 6VXX image
• 06:3106:31, 30 April 2020 diff hist +245 Jmenzago Week 14 →Visualization of Protein Structure: added 6VXX image
• 06:2906:29, 30 April 2020 diff hist +75 N File:Final Research Project S Protein with RBD Highlighted.PNG Full S protein 6VXX with areas of interest highlighted in red current
• 06:2706:27, 30 April 2020 diff hist 0 Jmenzago Week 14 →Visualization of Protein Structure: changed X's to 3
• 06:2606:26, 30 April 2020 diff hist +34 Jmenzago Week 14 →Visualization of Protein Structure: added notes about red boxes
• 06:2606:26, 30 April 2020 diff hist +267 Jmenzago Week 14 →Visualization of Protein Structure: added notes on third image
• 06:2406:24, 30 April 2020 diff hist +326 Jmenzago Week 14 →Visualization of Protein Structure: added notes on second image
• 06:2106:21, 30 April 2020 diff hist +171 Jmenzago Week 14 →Visualization of Protein Structure: added description of first image
• 06:2006:20, 30 April 2020 diff hist +18 Jmenzago Week 14 →Visualization of Protein Structure
• 06:1906:19, 30 April 2020 diff hist +155 Jmenzago Week 14 →Analysis of RBD Protein Sequence: added picture and caption
• 06:1706:17, 30 April 2020 diff hist +40 Jmenzago Week 14 →Combined Methods/Results: added section for analysis of RBD protein sequence
• 06:1406:14, 30 April 2020 diff hist +404 Jmenzago Week 14 →Visualization of Protein Structure: added methods for visualizing structures
• 06:0506:05, 30 April 2020 diff hist +104 Jmenzago Week 14 →Acknowledgements: added acknowledgement for Dr. Dahlquist
• 06:0406:04, 30 April 2020 diff hist +103 Jmenzago Week 14 →Generation of Phylogenetic Tree: added point about bats
• 05:0505:05, 30 April 2020 diff hist −58 Jmenzago Week 14 →Visualization of Protein Structure: changed links to images
• 05:0305:03, 30 April 2020 diff hist +253 Jmenzago Week 14 →Visualization of Protein Structure: added structure pictures
• 05:0105:01, 30 April 2020 diff hist +754 Jmenzago Week 14 →Purpose: added a purpose for the assignment
• 03:5503:55, 30 April 2020 diff hist +112 N File:Final Research Project RBD-ACE2 Beta Loop Interaction.PNG Shows the amino acids with notable differences highlighted interacting with the beta loop of ACE-2 current
• 03:5403:54, 30 April 2020 diff hist +112 N File:Final Research Project RBD-ACE2 N-terminus Interaction.PNG Shows the amino acids with notable differences highlighted interacting with the beta loop of ACE-2 current
• 03:5403:54, 30 April 2020 diff hist +95 N File:Final Research Project RBD-ACE2 Interaction.PNG Shows the amino acids with notable differences highlighted interacting with ACE-2 current
• 03:3803:38, 30 April 2020 diff hist +24 Jmenzago Week 14 →Multiple Sequence Alignment: noted that RBD was region with multiple differences
• 03:3803:38, 30 April 2020 diff hist +49 Jmenzago Week 14 →Multiple Sequence Alignment: noted that RBD is bold
• 03:3603:36, 30 April 2020 diff hist +390 Jmenzago Week 14 →Multiple Sequence Alignment: bolded the RBD region
• 03:2203:22, 30 April 2020 diff hist +422 Jmenzago Week 14 →Multiple Sequence Alignment: added analysis of clustal sequence
• 02:0102:01, 30 April 2020 diff hist +42 Jmenzago Week 14 →Combined Methods/Results: added section for visualization of protein structure

29 April 2020

• 21:3721:37, 29 April 2020 diff hist +521 Jmenzago Week 14 →Generation of Phylogenetic Tree: added analysis of phylogenetic tree
• 21:1421:14, 29 April 2020 diff hist +84 BIOL368/S20:Class Journal Week 14 →Jack Menzagopian: added signature
• 21:1321:13, 29 April 2020 diff hist +141 Jmenzago Week 14 →Acknowledgements: added how group and I communicated and what for
• 21:1221:12, 29 April 2020 diff hist +279 BIOL368/S20:Class Journal Week 14 →Jack Menzagopian: answered question 2 for the discussion
• 21:1021:10, 29 April 2020 diff hist +706 BIOL368/S20:Class Journal Week 14 →Jack Menzagopian: answered question 1 for the discussion
• 20:5820:58, 29 April 2020 diff hist +22 BIOL368/S20:Class Journal Week 14 added section for Jack Menzagopian

27 April 2020

• 22:4922:49, 27 April 2020 diff hist +289 Jmenzago Week 14 →References: added citation for Kan et al.
• 22:4722:47, 27 April 2020 diff hist +246 Jmenzago Week 14 →References: added citations for assignment pages
• 22:4122:41, 27 April 2020 diff hist +79 Jmenzago Week 14 →References: added reference for phylogeny.fr
• 22:1222:12, 27 April 2020 diff hist +58 Jmenzago Week 14 →Generation of Phylogenetic Tree: added image of phylogenetic tree
• 22:1122:11, 27 April 2020 diff hist +138 N File:SARS Phylogenetic Tree BIOL368 Final Project.PNG A phylogenetic tree comparing spike glycoproteins from SARS viruses from the three different outbreaks (2002, 2003-04, 2019) current