Uploads by Jmenzago
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This special page shows all uploaded files.
| Date | Name | Thumbnail | Size | Description |
|---|---|---|---|---|
| 23:59, 29 April 2020 | Coronavirus Structure Research Project.pdf (file) |  |
787 KB | Final research project for BIOL368 |
| 23:29, 29 April 2020 | Final Research Project S Protein with RBD Highlighted.PNG (file) |  |
488 KB | Full S protein 6VXX with areas of interest highlighted in red |
| 20:55, 29 April 2020 | Final Research Project RBD-ACE2 Beta Loop Interaction.PNG (file) |  |
152 KB | Shows the amino acids with notable differences highlighted interacting with the beta loop of ACE-2 |
| 20:54, 29 April 2020 | Final Research Project RBD-ACE2 N-terminus Interaction.PNG (file) |  |
117 KB | Shows the amino acids with notable differences highlighted interacting with the beta loop of ACE-2 |
| 20:54, 29 April 2020 | Final Research Project RBD-ACE2 Interaction.PNG (file) |  |
159 KB | Shows the amino acids with notable differences highlighted interacting with ACE-2 |
| 15:11, 27 April 2020 | SARS Phylogenetic Tree BIOL368 Final Project.PNG (file) |  |
60 KB | A phylogenetic tree comparing spike glycoproteins from SARS viruses from the three different outbreaks (2002, 2003-04, 2019) |
| 21:24, 22 April 2020 | ACE2 PredictProtein.png (file) |  |
35 KB | Image of the results from the PredictProtein for ACE2 from Yan et al. |
| 21:13, 22 April 2020 | Yan et al. (2020) Figure 4A Replicate With Secondary Structures.PNG (file) | _Figure_4A_Replicate_With_Secondary_Structures.PNG) |
340 KB | |
| 17:47, 22 April 2020 | Yan et al. (2020) Figure 4A Replicate RBD-PD Bridge 180.png (file) | _Figure_4A_Replicate_RBD-PD_Bridge_180.png) |
148 KB | Replication of the zoomed in portion turned 180 degrees of Figure 4A from Yan et al. (2020), replicated using iCn3D |
| 17:47, 22 April 2020 | Yan et al. (2020) Figure 4A Replicate RBD-PD Bridge.png (file) | _Figure_4A_Replicate_RBD-PD_Bridge.png) |
217 KB | Replication of the zoomed in portion of Figure 4A from Yan et al. (2020), replicated using iCn3D |
| 17:45, 22 April 2020 | Yan et al. (2020) Figure 4A Replicate.PNG (file) | _Figure_4A_Replicate.PNG) |
295 KB | Replication of Figure 4A from Yan et al. (2020), replicated using iCn3D |
| 20:28, 21 April 2020 | Week 13 NCBI ORF Finder Results.PNG (file) |  |
84 KB | An image of the results of the sequence translation of the S protein DNA sequence from severe acute respiratory syndrome coronavirus 2 isolate Wuhan-Hu-1 on NCBI ORF Finder |
| 17:06, 20 April 2020 | Yan et al. (2020) Figure 4A.png (file) | _Figure_4A.png) |
702 KB | Screenshot of Figure 4A from Yan et al. (2020) |
| 15:29, 17 April 2020 | 6M17 Yan et al Amino Acid Composition.PNG (file) |  |
40 KB | A pie chart of the amino acid composition of the S protein from protein 6M17 from Yan et al. (2020) |
| 15:18, 17 April 2020 | 6M17 Yan et al PredictProtein.png (file) |  |
36 KB | An image of the analysis results from PredictProtein of the S protein sequence protein 6M17 from Yan et al. |
| 23:59, 15 April 2020 | BIOL368 Yang Journal Club Presentation.pdf (file) | |
1.46 MB | Journal club presentation on the Yang et al. paper by Carolyne, Jack, and Karina for BIOL368 |
| 16:31, 20 February 2020 | Generated Phylogenetic Tree of First and Last Visits from Subjects Chosen for Study.PNG (file) |  |
47 KB | Generated Phylogenetic Tree of First and Last Visits from Subjects 1, 2, 3, 10, and 13 from Markham et al. |
| 16:16, 20 February 2020 | Phylogenetic Tree of First and Last Visits from Subjects Chosen for Study.PNG (file) |  |
47 KB | The generated phylogenetic tree of all HIV-1 clones for the first and last visits of subjects 1, 2, 3, 10, and 13 from Markham et al. to be used for the research project of Drew Cartmel and Jack Menzagopian |
| 17:08, 13 February 2020 | Jmenzago Week5 Activity2 PhylogeneticTree.PNG (file) |  |
15 KB | Image of a phylogenetic tree comparing 3 sequences of HIV-1 clones each from the first visits of 4 subjects from the Markham et al. study to be used for Assignment 6 for BIOL368/S20 |
| 17:04, 13 February 2020 | Jmenzago Week5 Activity1 PhylogeneticTree.PNG (file) |  |
8 KB | An image of the phylogenetic tree comparing 6 random sequences from the Markham et al. study to be used for Assignment 5 for BIOL368/S20 |
| 21:56, 22 January 2020 | Bioinformatics Profile Picture.jpg (file) |  |
1.8 MB | Picture of Jack Menzagopian to be used for his Bioinformatics course user page |
| 21:30, 22 January 2020 | JackMenzagopian Resume.pdf (file) | |
93 KB | Current version of Jack Menzagopian's Resume |
