Etchevers:Notebook/STRA6 in eye development/2009/08/04

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Build new revision of FindPeaks

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 Checked out revision 1380.<br/>
 oeil@cornee:~$ <br/>
 oeil@cornee:~$ cd trunk<br/>
 oeil@cornee:~/trunk$ ant fpsuite<br/>
 Buildfile: build.xml<br/>


 cleanfp:<br/>


 initfp:<br/>
   [mkdir] Created dir: /home/oeil/trunk/jars/fp4<br/>


 compile:<br/>
   [javac] Compiling 138 source files to /home/oeil/trunk/classes<br/>


 FindPeaks:<br/>
     [mkdir] Created dir: /home/oeil/trunk/tmp<br/>
       [jar] Building jar: /home/oeil/trunk/jars/fp4/FindPeaks.jar<br/>
    [delete] Deleting directory /home/oeil/trunk/tmp<br/>


 SeparateReads:<br/>
     [mkdir] Created dir: /home/oeil/trunk/tmp<br/>
       [jar] Building jar: /home/oeil/trunk/jars/fp4/SeparateReads.jar<br/>
    [delete] Deleting directory /home/oeil/trunk/tmp<br/>


 SortFiles:<br/>
     [mkdir] Created dir: /home/oeil/trunk/tmp<br/>
       [jar] Building jar: /home/oeil/trunk/jars/fp4/SortFiles.jar<br/>
    [delete] Deleting directory /home/oeil/trunk/tmp<br/>


 GenomeViewer:<br/>
     [mkdir] Created dir: /home/oeil/trunk/tmp<br/>
      [jar] Building jar: /home/oeil/trunk/jars/fp4/AlignSlice.jar<br/>
    [delete] Deleting directory /home/oeil/trunk/tmp<br/>


 ConvertToBed:<br/>
     [mkdir] Created dir: /home/oeil/trunk/tmp<br/>
       [jar] Building jar: /home/oeil/trunk/jars/fp4/ConvertToBed.jar<br/>
    [delete] Deleting directory /home/oeil/trunk/tmp<br/>


 MaqPetToBed:<br/>
     [mkdir] Created dir: /home/oeil/trunk/tmp<br/>
     [jar] Building jar: /home/oeil/trunk/jars/fp4/MaqPetToBed.jar<br/>
    [delete] Deleting directory /home/oeil/trunk/tmp<br/>


 BowtieToBedFormat:<br/>
   [mkdir] Created dir: /home/oeil/trunk/tmp<br/>
     [jar] Building jar: /home/oeil/trunk/jars/fp4/BowtieToBedFormat.jar<br/>
  [delete] Deleting directory /home/oeil/trunk/tmp<br/>


 buildfp:<br/>


 fptestdata:<br/>
    [copy] Copying 1 file to /home/oeil/trunk/jars/fp4<br/>


 changelog:<br/>
    [copy] Copying 1 file to /home/oeil/trunk/jars<br/>


 fpsuite:<br/>


 BUILD SUCCESSFUL<br/>
 Total time: 7 seconds<br/>

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  • Heather 06:10, 4 August 2009 (EDT):