Etchevers:Notebook/STRA6 in eye development/2009/08/01
 Genetics of human eye development
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Choosing mouse primers for ChIP trials upon Nicolas' returnAmorces pour tester enrichissement de fragments après ChIP - souris
Synteny pour le chromosome 1 vaguement du début jusqu'à 60,000,000 c’est pareil que 90-150,000,000 sur le chromosome 4 de souris (Ensembl). Et de 160,000,000-210,000,000 c’est pareil que de 140,000,000 a la fin sur le chromosome 1 murin. Si je BLAST une séquence du chr 1 humain elle s'aligne sur le chr 4 murin position 58,680K-63,140K comme attendu entre 4B3 et 4C1, beaucoup de petites séquences alignées. La demande etait: 07-31 15:29 76HH15VW01N blastn Nucleotide Sequence (7158 letters) 7158 gpipe/10090/all_contig (expires) 08-02 03:29 Parmi les resultats, ref|NT_039260.7|Mm4_39300_37 Mus musculus chromosome 4 genomi... 1389 Mais il y en avait 96638 d'alignements!! Parmi eux quelques sequences (et cela formatte tres mal, et je recois l'avertissement "WARNING: This page is 205 kilobytes long; some browsers may have problems editing pages approaching or longer than 32kb. Please consider breaking the page into smaller sections." Si seulement je voyais comment preserver les retours chariots! >ref|NT_039260.7|Mm4_39300_37 Download subject sequence spanning the HSP Mus musculus chromosome 4 genomic contig, strain C57BL/6J Length=28591323 Features flanking this part of subject sequence: 7941 bp at 5' side: hypothetical protein LOC52829 313973 bp at 3' side: multiple PDZ domain protein
Score = 1389 bits (1540), Expect = 0.0 Identities = 2606/3795 (68%), Gaps = 40/3795 (1%) Strand=Plus/Minus
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Query 2485 CCATCAGTGTGCTGTATTCAGGAAACCCATCTCACATGCAGAGACACACATAGGCTCAAA 2544 |
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Sbjct 20240109 CCAACATTTTGCTGCTTACAGGAAACTCATCTCAGAGAAAAAGATAGACACTACCTCAGA 20240050 Query 2545 ATAAAGGGATGGAGGAAGATCTACCAAGCAAACGGAAAACAAAAAAAGGCAGGGGTTGCA 2604 |
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Sbjct 20240049 ATGAAAGGCTGGAAAACAATTTTCCAAGCAAATGGTATGAAGAAACAAGCAGGAGTAGCC 20239990 Query 2605 ATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGC 2664 |
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Sbjct 20239989 ATCCTAATATCTGATAAGATTGACTTCCAACCCAAAATCATCAAAAAAGACAAGGAGGGA 20239930 Query 2665 CATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATATAT 2724 |
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Sbjct 20239929 CACTTCATTCTCATCAAAGGTAAAATCCTCCAAGAGGAACTCTCAATTCTGAATATCTAT 20239870 Query 2725 GCACCCAATACAGGAGCACCAAGATTCA-TAAAGCAAGTCCTGAGTGACCTACAAAG-AG 2782 |
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Sbjct 20239869 GCTCCAAATACAAGAGCAGCCACATTCACTAAAGAAACT--TTAGTAAAGCTCAAAGCAC 20239812 Query 2783 ACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACA 2842 |
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Sbjct 20239811 ACATTGCGCCTCACACAATAATAGTGGGAGACTTCAACACACCACTTTCACCAATGGACA 20239752 Query 2843 GATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCAGCAAG 2902 |
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Sbjct 20239751 GATCATGGAAACAGAAACTAAACAGGGACACACTGAAACTAACAGAAGTGATGAAACAAA 20239692 Query 2903 CGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTT 2962 |
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Sbjct 20239691 TGGATCTGACAGATATCTACAGAACATTTTTCCCTAAAACAAAAGGATATACCTTCTTCT 20239632 Query 2963 CAGCACCACACCACACCTACTCCAAAATTGACCACATACTGGGAAGTAAAGCACTCCTCA 3022 |
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Sbjct 20239631 CAGCACCTCATGGTACCTTCTCCAAAATTGACCACATAATAGGTCACAAATCAGGCCTCA 20239572 Query 3023 GCAAATGTAAAAGAACAGAAATTATAACAAACTATC-TCTCAGACCACAGTGCAATCAAA 3081 |
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Sbjct 20239571 ACAGATTCAAAAATATTGAAATTGTCCCATG-TATCCTATCAGATCACCATGCACTAAGG 20239513 Query 3082 CTAGAACT-CAGGATTAAGA-ATCTCACTCAAAACCGCTCAACTACATGGAAACTGAACA 3139 |
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Sbjct 20239512 CT-GATCTTCAATAACAAAATAAATAACAGAAAGCCAA-CATTCACATGGAAACTGAACA 20239455 Query 3140 ACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGTTGTTCT 3199 |
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Sbjct 20239454 ACACTCTTCTCAATGATACCTTGGTCAAGGAAGGAATAAAGAAAGAAATTAAAGACTTTT 20239395 Query 3200 TTGAAACCAATGAGAACAAAGACACAACATACCAGAATCTCTGGGATGCATTCAAAGCAG 3259 |
Sbjct 20239394 TAGAGTTTAATGAAAATGAAGCCACAACGTACCCAAACCTTTGGGACACAATGAAAGCAT 20239335 Query 3260 TGTGCAGAGGGAAATTTATAGCACTGAATGCCCACAAGAGAAAGCAGGAAAGATCCAAAA 3319 |
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Sbjct 20239334 TTCTAAGAGGGAAACTCATAGCTATGAGTGCCTTCAAGAAAAAACGGGAGAGAGCACATA 20239275 Query 3320 TTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGA-GCAAACACATTCAAAA 3378 |
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Sbjct 20239274 CTAGCAGCTTGACAACACATCTAAAAGCTCTAGAAAAAAAGGAAGCAAATTCACCCAAGA 20239215 Query 3379 GCTAGCAGAAGGGAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAA 3438 |
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Sbjct 20239214 GG-AGTAGATGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAAGA 20239156 Query 3439 AAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTTTTTTGAAAGGATAAACAAAATT 3498 |
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Sbjct 20239155 AGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATA 20239096 Query 3499 GATAGACCGCTAGCAAGACTAA-TAAAGAAAAAAAGAGAGAAGAATCAAATAGATGCAAT 3557 |
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Sbjct 20239095 GATAAACCCTTAGCTAGACTCACTAAAGGGCACAGG-GACAAAATCCTAATTAACAAAAT 20239037 Query 3558 AAAAAAATGATAAAGGGGATATCACCACCAATCCCACAGAAATACAAACTACCATCAGAG 3617 |
Sbjct 20239036 CAGAAA-TGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGAT 20238978 Query 3618 AATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCC 3677 |
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Sbjct 20238977 CCTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTTC 20238918 Query 3678 TGGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAA 3737 |
Sbjct 20238917 TGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCA 20238858 Query 3738 TAACAGGAGCTGAAATTGTGGCAATAATCAATAGCTTACCAACCAAAAAGAGTCCAGGAC 3797 |
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Sbjct 20238857 TATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGAC 20238798 Query 3798 CAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTC 3857 |
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Sbjct 20238797 CAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCAGTTCTGC 20238738 Query 3858 TGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGACGCCA 3917 |
Sbjct 20238737 ACAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAACTCATTTTATGAAGCCA 20238678 Query 3918 GCATCATTCTGATACCAAAGCCAGGCAGAGACACAACAAAAAAAGAGAATTTTAGACCAA 3977 |
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Sbjct 20238677 CTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAA 20238618 Query 3978 TATCCTTGATGAACATTGAGGCAAAAATCCTCAATAAAACACTGGCAAAATGAATCCAGC 4037 |
Sbjct 20238617 TTTCTCTTATGAACATCGATGCAAAAATCCTTAATAAAATTCTCGCTAACCGAATCCAAG 20238558 Query 4038 AGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCT 4097 |
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Sbjct 20238557 AACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGAT 20238498 Query 4098 GGTTCAATATACGCAAATCAATAAATGTAATCCAGCATAAAAACAGAGCCAAAGACAAAA 4157 |
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Sbjct 20238497 GGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAAAA 20238438 Query 4158 ACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCA 4217 |
Sbjct 20238437 ACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATTCA 20238378 Query 4218 TGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTA 4277 |
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Sbjct 20238377 TGATAAAAGTTCTGGAAAGATCAGGAATTCAAGGCCAATACCTAAACATGATAAAAGCAA 20238318 Query 4278 TCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCTCTT 4337 |
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Sbjct 20238317 TCTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCAC 20238258 Query 4338 TGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGG 4397 |
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Sbjct 20238257 TAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACTTG 20238198 Query 4398 AAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAG 4457 |
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Sbjct 20238197 AAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAAG 20238138 Query 4458 AGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATATCTAGAAAACCCCATTG 4517 |
Sbjct 20238137 AGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAA 20238078 Query 4518 TCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAA 4577 |
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Sbjct 20238077 ATTCTACCAGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAAAA 20238018 Query 4578 TCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAA 4637 |
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Sbjct 20238017 TAAACTCAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAAACAGGCTGAGAAAGAAA 20237958 Query 4638 TCA-TGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAA 4696 |
Sbjct 20237957 TTAGGGAAACAACACCC-TTCTCAATAGTCACAAATAATATAAAATATCTTGGCGTGACT 20237899 Query 4697 CTTACAAGGGATGTGAAGGGCCTCTTCAAGGAGAACTACAAACCTCTGCTCAAGGAAATA 4756 |
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Sbjct 20237898 CTAACTAAGGAGGTGAAAGATCTGTATGATAAAAACTTCAAATCTCTGAAGAAAGAAATT 20237839 Query 4757 AAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATC 4816 |
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Sbjct 20237838 AAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAACATT 20237779 Query 4817 GTGAAAATGGCCATACTCCTCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTA 4876 |
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Sbjct 20237778 GTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATTAAAATT 20237719 Query 4877 CCAATGACTTTCTTCACAGAACTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAG 4936 |
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Sbjct 20237718 CCAACTCAATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAACAAA 20237659 Query 4937 AGAGCCCACATCGCCAAGTCAATCCT--AAGCCAAAAGAACAAAGCTGGAGGCATCACAC 4994 |
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Sbjct 20237658 AAACCGAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAAC--CTCTGGTGGAATCACCA 20237601 Query 4995 TACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACC 5054 |
Sbjct 20237600 TGCCTGACCTAAAACTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATA 20237541 Query 5055 AAAACAGAGATATTGATCAATGGAACAGAACAGGGCCCTCAGAAATAACGCCGCATATCT 5114 |
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Sbjct 20237540 GAGACAGACAAGTGGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCT 20237481 Query 5115 ACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTAT 5174 |
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Sbjct 20237480 ATGGTCACTTGATCTTCGACAAGGGAGCCAAAACCATCCAGTGGAAGAAAGACAGCATTT 20237421 Query 5175 TTAATAAATGGTGCTGGGAAAACTGGCTAGCCAT-ATGTAGAAAGCTGAAACTGGATCCC 5233 |
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Sbjct 20237420 TCAACAATTGGTGCTGGCACAACTGG-TTGTTATCATGTAGAAGAATGCGAATCGATCCA 20237362 Query 5234 TTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGAGTTAAACGTTAGACCT 5293 |
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Sbjct 20237361 TACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCA 20237302 Query 5294 AAAACCATAAAAACCCTAGAAGAAAACGTAGGCATTACCATTCAGGACATAGGCATGGGC 5353 |
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Sbjct 20237301 GAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGG 20237242 Query 5354 AAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGG 5413 |
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Sbjct 20237241 GAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGG 20237182 Query 5414 GATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACT-ACCATCAGAGTGAACAG 5472 |
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Sbjct 20237181 GACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATAAGA-CAAAAAG 20237123 Query 5473 GCAACCTACAAAATGGGAGAAAATTTTTGC--AACCTACTCATCTGACAAAGGGCTAATA 5530 |
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Sbjct 20237122 ACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTA--AATCAGATAGGGGACTAATA 20237065 Query 5531 TCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAA 5590 |
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Sbjct 20237064 TCCAACATATATAAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAA 20237005 Query 5591 AAGTGGGTGAAGGACATGAACAGACACTTCTCA---AAAGAAGACATTTATGCAGCCAAC 5647 |
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Sbjct 20237004 AAATGGGGCTCAGAACTGAACAAAGAATTCTCACCTGAGGAATAC-CGAATG--GCAGAG 20236948 Query 5648 AGACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACA 5707 |
Sbjct 20236947 AAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACC 20236888 Query 5708 ATGAGATACCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGG 5767 |
Sbjct 20236887 CTGAGATTCCACCTCACACCAGTGAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGA 20236828 Query 5768 TGCTGGAGAGGATGTGGAGAAATAGGAACATTTTTACACTGTTGGTGGGACTGTAAACTA 5827 |
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Sbjct 20236827 TGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTT 20236768 Query 5828 GTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTGGAAATACCA 5887 |
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Sbjct 20236767 GTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCG 20236708 Query 5888 TTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCT-A 5946 |
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Sbjct 20236707 GAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGA----AGCCCCAACTGGTAA 20236652 Query 5947 TAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGCAAAGACTTGGAA 6006 |
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Sbjct 20236651 GAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAACTGGAA 20236592 Query 6007 CCAACCCAAATGTCTAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCAT 6066 |
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Sbjct 20236591 AGAAACCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAAT 20236532 Query 6067 GGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAA 6126 |
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Sbjct 20236531 GGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGA 20236472 Query 6127 ATTGGAAATCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATT 6186 |
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Sbjct 20236471 CCTGGAGAGCATCATCCTGAGTGAGGTAACACAATCACAAAGGAACTCACACAATATGTA 20236412 Query 6187 CTCACTCATAGGTGG 6201 |
Sbjct 20236411 CTCACTGATAAGTGG 20236397
Features flanking this part of subject sequence: 30424 bp at 5' side: similar to major urinary protein 1 42331 bp at 3' side: similar to major urinary protein 1
Score = 1379 bits (1528), Expect = 0.0 Identities = 2606/3797 (68%), Gaps = 44/3797 (1%) Strand=Plus/Minus Query 2425 AATGGACTAAATGCTCCAATTAAAAGACACAGACTAGCAAATTGGATAAAGAGTCAAGAC 2484 |
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Sbjct 257771 AATGGTCTCAACTCGCCAATAAAAAGACATAGACTAACAAACTGGCTACACAAACAAGAC 257712 Query 2485 CCATCAGTGTGCTGTATTCAGGAAACCCATCTCACATGCAGAGACACACATAGGCTCAAA 2544 |
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Sbjct 257711 CCAACATTTTGCTGCTTACAGGAAACTCATCTCAGAGAAAAAGATAGACACTACCTCAGA 257652 Query 2545 ATAAAGGGATGGAGGAAGATCTACCAAGCAAACGGAAAACAAAAAAAGGCAGGGGTTGCA 2604 |
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Sbjct 257651 ATGAAAGGCTGGAAAACAATTTTCCAAGCAAATGGTATGAAGAAACAAGCAGGAGTAGCC 257592 Query 2605 ATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAG--ATCAAAAGAGACAAAGAAG 2662 |
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Sbjct 257591 ATCCTAATATCTGATAAGATTGACTTCCAACC--CAAAGTCATCAAAAAAGACAAGGAGG 257534 Query 2663 GCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATAT 2722 |
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Sbjct 257533 GACACTTCATTCTCATCAAAGGTAAAATCCTCCAAGAGGAACTCTCAATTCTGAATATCT 257474 Query 2723 ATGCACCCAATACAGGAGCACCAAGATTCA-TAAAGCAAGTCCTGAGTGACCTACAAAG- 2780 |
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Sbjct 257473 ATGCTCCAAATACAAGAGCAGCCACATTCACTAAAGAAACT--TTAGTAAAGCTCAAAGC 257416 Query 2781 AGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGA 2840 |
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Sbjct 257415 ACACATTGCGCCTCACACAATAATAGTGGGAGACTTCAACACACCACTTTCACCAATGGA 257356 Query 2841 CAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCAGCA 2900 |
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Sbjct 257355 CAGATCATGGAAACAGAAACTAAACAGGGACACACTGAAACTAACAGAAGTGATGAAACA 257296 Query 2901 AGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTT 2960 |
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Sbjct 257295 AATGGATCTGACAGATATCTAGAGAACATTTTACCCTAAAACAAAAGGATATACCTTCTT 257236 Query 2961 TTCAGCACCACACCACACCTACTCCAAAATTGACCACATACTGGGAAGTAAAGCACTCCT 3020 |
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Sbjct 257235 CTCAGCACCTCATGGTACCTTCTCCAAAATTGACCACATAATAGGTCACAAATCAGGCCT 257176 Query 3021 CAGCAAATGTAAAAGAACAGAAATTATAACAAACTATC-TCTCAGACCACAGTGCAATCA 3079 |
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Sbjct 257175 CAACAGATTCAAAAATATTGAAATTGTCCCATG-TATCCTATCAGATCACCATGCACTAA 257117 Query 3080 AACTAGAACT-CAGGATTAAGA-ATCTCACTCAAAACCGCTCAACTACATGGAAACTGAA 3137 |
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Sbjct 257116 GGCT-GATCTTCAATAACAAAATAAATAACAGAAAGCCAA-CATTCACATGGAAACTGAA 257059 Query 3138 CAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGTTGTT 3197 |
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Sbjct 257058 CAACACTCTTCTCAATGATACCTTGGTCAAGGAAGGAATAAAGAAAGAAATTAAAGACTT 256999 Query 3198 CTTTGAAACCAATGAGAACAAAGACACAACATACCAGAATCTCTGGGATGCATTCAAAGC 3257 |
Sbjct 256998 TTTAGAGTTTAATGAAAATGAAGCCACAACGTACCCAAACCTTTGGGACACAATGAAAGC 256939 Query 3258 AGTGTGCAGAGGGAAATTTATAGCACTGAATGCCCACAAGAGAAAGCAGGAAAGATCCAA 3317 |
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Sbjct 256938 ATTTCTAAGAGGGAAACTCATAGCTATGAGTGCCTTCAAGAAAAAACGGGAGAGAGCACA 256879 Query 3318 AATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGA-GCAAACACATTCAA 3376 |
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Sbjct 256878 TACTAGCAGCTTGACAACACATCTAAAAGCTCTAGAAAAAAAGGAAGCAAATTCACCCAA 256819 Query 3377 AAGCTAGCAGAAGGGAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACAC 3436 |
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Sbjct 256818 GAGG-AGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAA 256760 Query 3437 AAAAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTTTTTTGAAAGGATAAACAAAA 3496 |
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Sbjct 256759 GAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGA 256700 Query 3497 TTGATAGACCGCTAGCAAGACTAA-TAAAGAAAAAAAGAGAGAAGAATCAAATAGATGCA 3555 |
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Sbjct 256699 TAGATAAACCCTTAGCTAGACTCACTAAAGGGCACAGG-GACAAAATCCTAATTAACAAA 256641 Query 3556 ATAAAAAAATGATAAAGGGGATATCACCACCAATCCCACAGAAATACAAACTACCATCAG 3615 |
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Sbjct 256640 ATCAGAAA-TGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAG 256582 Query 3616 AGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATT 3675 |
Sbjct 256581 ATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATT 256522 Query 3676 CCTGGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACC 3735 |
Sbjct 256521 TCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCC 256462 Query 3736 AATAACAGGAGCTGAAATTGTGGCAATAATCAATAGCTTACCAACCAAAAAGAGTCCAGG 3795 |
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Sbjct 256461 CATATCCCCTAAAGAAATAGTAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGG 256402 Query 3796 ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCT 3855 |
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Sbjct 256401 ACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCAGTTCT 256342 Query 3856 TCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGACGC 3915 |
Sbjct 256341 GCACAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAACTCATTTTATGAAGC 256282 Query 3916 CAGCATCATTCTGATACCAAAGCCAGGCAGAGACACAACAAAAAAAGAGAATTTTAGACC 3975 |
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Sbjct 256281 CACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACC 256222 Query 3976 AATATCCTTGATGAACATTGAGGCAAAAATCCTCAATAAAACACTGGCAAAATGAATCCA 4035 |
Sbjct 256221 AATTTCTCTTATGAACATCGATGCAAAAATCCTTAATAAAATTCTCGCTAACCGAATCCA 256162 Query 4036 GCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG 4095 |
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Sbjct 256161 AGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGG 256102 Query 4096 CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATAAAAACAGAGCCAAAGACAA 4155 |
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Sbjct 256101 ATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAA 256042 Query 4156 AAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTT 4215 |
Sbjct 256041 AAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATT 255982 Query 4216 CATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGC 4275 |
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Sbjct 255981 CATGATAAAAGTTCTGGAAAGATCAGGAATTCAAGGCCAATACCTAAACATGATAAAAGC 255922 Query 4276 TATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCTC 4335 |
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Sbjct 255921 AATCTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCC 255862 Query 4336 TTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTT 4395 |
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Sbjct 255861 ACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACT 255802 Query 4396 GGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAA 4455 |
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Sbjct 255801 TGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAA 255742 Query 4456 AGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATATCTAGAAAACCCCAT 4515 |
Sbjct 255741 AGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAA 255682 Query 4516 TGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAA 4575 |
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Sbjct 255681 AAATTCCAACAGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAA 255622 Query 4576 AATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCA 4635 |
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Sbjct 255621 AATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGA 255562 Query 4636 AATCA-TGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCC 4694 |
Sbjct 255561 AATTAGGGAAACAACACCC-TTCTCAATAGCCACAAATAATATAAAATATCTCGGCGTGA 255503 Query 4695 AACTTACAAGGGATGTGAAGGGCCTCTTCAAGGAGAACTACAAACCTCTGCTCAAGGAAA 4754 |
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Sbjct 255502 CTCTAACGAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAGTCCCTGAAGAAAGAAA 255443 Query 4755 TAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATA 4814 |
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Sbjct 255442 TTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAACA 255383 Query 4815 TCGTGAAAATGGCCATACTCCTCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGC 4874 |
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Sbjct 255382 TTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATTAAAA 255323 Query 4875 TACCAATGACTTTCTTCACAGAACTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAA 4934 |
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Sbjct 255322 TTCCAACTCAATTCTTCAAGGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAACA 255263 Query 4935 AGAGAGCCCACATCGCCAAGTCAATCCT--AAGCCAAAAGAACAAAGCTGGAGGCATCAC 4992 |
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Sbjct 255262 AAAAACCGAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAAC--CTCTGGTGGAATCAC 255205 Query 4993 ACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTA 5052 |
Sbjct 255204 CATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTA 255145 Query 5053 CCAAAACAGAGATATTGATCAATGGAACAGAACAGGGCCCTCAGAAATAACGCCGCATAT 5112 |
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Sbjct 255144 TAGAGACAGACAAGTGGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACAC 255085 Query 5113 CTACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCT 5172 |
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Sbjct 255084 CTATGGTCACTTGATCTTCGACAAGGGAGCCAAAACCATCCAGTGGAAGAAAGACAGCAT 255025 Query 5173 ATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCAT-ATGTAGAAAGCTGAAACTGGATC 5231 |
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Sbjct 255024 TTTCAACAATTGGTGCTGGCACAACTGG-TTGTTATCATGTAGAAGAATGCGAATCGATC 254966 Query 5232 CCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGAGTTAAACGTTAGAC 5291 |
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Sbjct 254965 CATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC 254906 Query 5292 CTAAAACCATAAAAACCCTAGAAGAAAACGTAGGCATTACCATTCAGGACATAGGCATGG 5351 |
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Sbjct 254905 CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAG 254846 Query 5352 GCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAAT 5411 |
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Sbjct 254845 GGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAAT 254786 Query 5412 GGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACT-ACCATCAGAGTGAAC 5470 |
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Sbjct 254785 GGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATAAGA-CAAAA 254727 Query 5471 AGGCAACCTACAAAATGGGAGAAAATTTTTGC--AACCTACTCATCTGACAAAGGGCTAA 5528 |
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Sbjct 254726 AGACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTA--AATCAGATAGGGGACTAA 254669 Query 5529 TATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCA 5588 |
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Sbjct 254668 TATCCAACATATATAAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTA 254609 Query 5589 AAAAGTGGGTGAAGGACATGAACAGACACTTCTCA---AAAGAAGACATTTATGCAGCCA 5645 |
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Sbjct 254608 AAAAATGGGGCTCAGAACTGAACAAAGAATTCTCACCTGAGGAATAC-CGAATG--GCAG 254552 Query 5646 ACAGACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCA 5705 |
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Sbjct 254551 AGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAA 254492 Query 5706 CAATGAGATACCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACA 5765 |
Sbjct 254491 CCCTGAGATTCCACCTCACACCAGTGAGAATGGCTAAGATCAAAAATTCAGGTGACAGCA 254432 Query 5766 GGTGCTGGAGAGGATGTGGAGAAATAGGAACATTTTTACACTGTTGGTGGGACTGTAAAC 5825 |
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Sbjct 254431 GATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGC 254372 Query 5826 TAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTGGAAATAC 5885 |
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Sbjct 254371 TTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTAC 254312 Query 5886 CATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCT 5945 |
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Sbjct 254311 CGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGA----AGCCCCAACTGGT 254256 Query 5946 -ATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGCAAAGACTTGG 6004 |
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Sbjct 254255 AAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAACTGG 254196 Query 6005 AACCAACCCAAATGTCTAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACC 6064 |
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Sbjct 254195 AAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACA 254136 Query 6065 ATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATG 6124 |
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Sbjct 254135 ATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATG 254076 Query 6125 AAATTGGAAATCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATA 6184 |
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Sbjct 254075 GACCTGGAGAGCATCATCCTGAGTGAGGTAACACAATCACAAAGGAACTCACACAATATG 254016 Query 6185 TTCTCACTCATAGGTGG 6201 |
Sbjct 254015 TACTCACTGATAAGTGG 253999
Features flanking this part of subject sequence: 85416 bp at 5' side: hypothetical protein 105101 bp at 3' side: nuclear factor I/B
Score = 1377 bits (1526), Expect = 0.0 Identities = 2608/3798 (68%), Gaps = 46/3798 (1%) Strand=Plus/Minus Query 2425 AATGGACTAAATGCTCCAATTAAAAGACACAGACTAGCAAATTGGATAAAGAGTCAAGAC 2484 |
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Sbjct 21466212 AATGGTCTCAACTCGCCAATAAAAAGACATAGACTAACAAACTGGCTACACAAACAAGAC 21466153 Query 2485 CCATCAGTGTGCTGTATTCAGGAAACCCATCTCACATGCAGAGACACACATAGGCTCAAA 2544 |
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Sbjct 21466152 CCAACATTTTGCTGCTTACAGGAAACTCATCTCAGAGAAAAAGATAGACACTACCTCAGA 21466093 Query 2545 ATAAAGGGATGGAGGAAGATCTACCAAGCAAACGGAAAACAAAAAAAGGCAGGGGTTGCA 2604 |
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Sbjct 21466092 ATGAAAGGCTGGAAAACAATTTTCCAAGCAAATGGTATGAAGAAACAAGCAGGAGTAGCC 21466033 Query 2605 ATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAG--ATCAAAAGAGACAAAGAAG 2662 |
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Sbjct 21466032 ATCCTAATATCTGATAAGATTGACTTCCAACC--CAAAGTCATCAAAAAAGACAAGGAGG 21465975 Query 2663 GCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATAT 2722 |
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Sbjct 21465974 GACACTTCATTCTCATCAAAGGTAAAATCCTCCAAGAGGAACTCTCAATTCTGAATATCT 21465915 Query 2723 ATGCACCCAATACAGGAGCACCAAGATTCA-TAAAGCAAGTCCTGAGTGACCTACAAAG- 2780 |
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Sbjct 21465914 ATGCTCCAAATACAAGAGCAGCCACATTCACTAAAGAAACT--TTAGTAAAGCTCAAAGC 21465857 Query 2781 AGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGA 2840 |
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Sbjct 21465856 ACACATTGCGCCTCACACAATAATAGTGGGAGACTTCAACACACCACTTTCACCAATGGA 21465797 Query 2841 CAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCAGCA 2900 |
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Sbjct 21465796 CAGATCATGGAAACAGAAACTAAACAGGGACACACTGAAACTAACAGAAGTGATGAAACA 21465737 Query 2901 AGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTT 2960 |
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Sbjct 21465736 AATGGATCTGACAGATATCTACAGAACATTTTACCCTAAAACAAAAGGATATACCTTCTT 21465677 Query 2961 TTCAGCACCACACCACACCTACTCCAAAATTGACCACATACTGGGAAGTAAAGCACTCCT 3020 |
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Sbjct 21465676 CTCAGCACCTCATGGTACCTTCTCCAAAATTGACCACATAATAGGTCACAAATCAGGCCT 21465617 Query 3021 CAGCAAATGTAAAAGAACAGAAATTATAACAAACTATC-TCTCAGACCACAGTGCAATCA 3079 |
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Sbjct 21465616 CAACAGATTCAAAAATATTGAAATTGTCCCATG-TATCCTATCAGATCACCATGCACTAA 21465558 Query 3080 AACTAGAACT-CAGGATTAAGA-ATCTCACTCAAAACCGCTCAACTACATGGAAACTGAA 3137 |
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Sbjct 21465557 GGCT-GATCTTCAATAACAAAATAAATAACAGAAAGCCAA-CATTCACATGGAAACTGAA 21465500 Query 3138 CAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGTTGTT 3197 |
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Sbjct 21465499 CAACACTCTTCTCAATGATACCTTGGTCAAGGAAGGAATAAAGAAAGAAATTAAAGACTT 21465440 Query 3198 CTTTGAAACCAATGAGAACAAAGACACAACATACCAGAATCTCTGGGATGCATTCAAAGC 3257 |
Sbjct 21465439 TTTAGAGTTTAATGAAAATGAAGCCACAACGTACCCAAACCTTTGGGACACAATGAAAGC 21465380 Query 3258 AGTGTGCAGAGGGAAATTTATAGCACTGAATGCCCACAAGAGAAAGCAGGAAAGATCCAA 3317 |
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Sbjct 21465379 ATTTCTAAGAGGGAAACTCATAGCTATGAGTGCCTTCAAGAAAAAACGGGAGAGAGCACA 21465320 Query 3318 AATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGA-GCAAACACATTCAA 3376 |
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Sbjct 21465319 TACTAGCAGCTTGACAACACATCTAAAAGCTCTAGAAAAAAAGGAAGCAAATTCACCCAA 21465260 Query 3377 AAGCTAGCAGAAGGGAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACAC 3436 |
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Sbjct 21465259 GAGG-AGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAA 21465201 Query 3437 AAAAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTTTTTTGAAAGGATAAACAAAA 3496 |
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Sbjct 21465200 GAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGA 21465141 Query 3497 TTGATAGACCGCTAGCAAGACTAA-TAAAGAAAAAAAGAGAGAAGAATCAAATAGATGCA 3555 |
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Sbjct 21465140 TAGATAAACCCTTAGCTAGACTCACTAAAGGGCACAGG-GACAAAATCCTAATTAACAAA 21465082 Query 3556 ATAAAAAAATGATAAAGGGGATATCACCACCAATCCCACAGAAATACAAACTACCATCAG 3615 |
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Sbjct 21465081 ATCAGAAA-TGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAG 21465023 Query 3616 AGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATT 3675 |
Sbjct 21465022 ATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATT 21464963 Query 3676 CCTGGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACC 3735 |
Sbjct 21464962 TCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCC 21464903 Query 3736 AATAACAGGAGCTGAAATTGTGGCAATAATCAATAGCTTACCAACCAAAAAGAGTCCAGG 3795 |
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Sbjct 21464902 CATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGG 21464843 Query 3796 ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCT 3855 |
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Sbjct 21464842 ACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCAGTTCT 21464783 Query 3856 TCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGACGC 3915 |
Sbjct 21464782 GCACAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAACTCATTTTATGAAGC 21464723 Query 3916 CAGCATCATTCTGATACCAAAGCCAGGCAGAGACACAACAAAAAAAGAGAATTTTAGACC 3975 |
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Sbjct 21464722 CACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACC 21464663 Query 3976 AATATCCTTGATGAACATTGAGGCAAAAATCCTCAATAAAACACTGGCAAAATGAATCCA 4035 |
Sbjct 21464662 AATTTCTCTTATGAACATCGATGCAAAAATCCTTAATAAAATTCTCGCTAACCGAATCCA 21464603 Query 4036 GCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG 4095 |
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Sbjct 21464602 AGAACACATTAAAGCGATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGG 21464543 Query 4096 CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATAAAAACAGAGCCAAAGACAA 4155 |
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Sbjct 21464542 ATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAA 21464483 Query 4156 AAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTT 4215 |
Sbjct 21464482 AAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATT 21464423 Query 4216 CATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGC 4275 |
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Sbjct 21464422 CATGATAAAAGTTCTGGAAAGATCAGGAATTCAAGGCCAATACCTAAACATGATAAAAGC 21464363 Query 4276 TATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCTC 4335 |
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Sbjct 21464362 AATCTACAGCAAACCAGTAGCAAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCC 21464303 Query 4336 TTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTT 4395 |
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Sbjct 21464302 ACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACT 21464243 Query 4396 GGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAA 4455 |
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Sbjct 21464242 TGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAA 21464183 Query 4456 AGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATAT-CTAGAAAACCCCA 4514 |
Sbjct 21464182 AGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATGCAAGTGACCCTAA 21464123 Query 4515 TTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACA 4574 |
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Sbjct 21464122 AAATTCCAACAGAGAA-CTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATA 21464064 Query 4575 AAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCC 4634 |
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Sbjct 21464063 AAATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAG 21464004 Query 4635 AAATCA-TGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATC 4693 |
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Sbjct 21464003 AAATTAGGGAAACAACACCC-TTCTCAATAGCCACAAATAATATAAAATATCTCGGCGTG 21463945 Query 4694 CAACTTACAAGGGATGTGAAGGGCCTCTTCAAGGAGAACTACAAACCTCTGCTCAAGGAA 4753 |
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Sbjct 21463944 ACTCTAACGAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAGTCCCTGAAGAAAGAA 21463885 Query 4754 ATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAAT 4813 |
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Sbjct 21463884 ATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAAC 21463825 Query 4814 ATCGTGAAAATGGCCATACTCCTCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAG 4873 |
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Sbjct 21463824 ATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATTAAA 21463765 Query 4874 CTACCAATGACTTTCTTCACAGAACTGGAAAAAACTACTTTAAAGTTCATATGGAACCAA 4933 |
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Sbjct 21463764 ATTCCAACTCAATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAAC 21463705 Query 4934 AAGAGAGCCCACATCGCCAAGTCAATCCT--AAGCCAAAAGAACAAAGCTGGAGGCATCA 4991 |
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Sbjct 21463704 AAAAAACCGAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAAC--CTCTGGTGGAATCA 21463647 Query 4992 CACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGT 5051 |
Sbjct 21463646 CCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGT 21463587 Query 5052 ACCAAAACAGAGATATTGATCAATGGAACAGAACAGGGCCCTCAGAAATAACGCCGCATA 5111 |
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Sbjct 21463586 ATAGAGACAGACAAGTGGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACA 21463527 Query 5112 TCTACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCC 5171 |
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Sbjct 21463526 CCTATGGTCACTTGATCTTCGACAAGGGAGCCAAAACCATCCAGTGGAAGAAAGACAGCA 21463467 Query 5172 TATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCAT-ATGTAGAAAGCTGAAACTGGAT 5230 |
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Sbjct 21463466 TTTTCAACAATTGGTGCTGGCACAACTGG-TTGTTATCATGTAGAAGAATGCGAATTGAT 21463408 Query 5231 CCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGAGTTAAACGTTAGA 5290 |
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Sbjct 21463407 CCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAA 21463348 Query 5291 CCTAAAACCATAAAAACCCTAGAAGAAAACGTAGGCATTACCATTCAGGACATAGGCATG 5350 |
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Sbjct 21463347 CCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACA 21463288 Query 5351 GGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAA 5410 |
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Sbjct 21463287 GGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAA 21463228 Query 5411 TGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACT-ACCATCAGAGTGAA 5469 |
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Sbjct 21463227 TGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATAAGA-CAAA 21463169 Query 5470 CAGGCAACCTACAAAATGGGAGAAAATTTTTGC--AACCTACTCATCTGACAAAGGGCTA 5527 |
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Sbjct 21463168 AAGACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTA--AATCAGATAGGGGACTA 21463111 Query 5528 ATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATC 5587 |
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Sbjct 21463110 ATATCCAACATATATAAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCCTT 21463051 Query 5588 AAAAAGTGGGTGAAGGACATGAACAGACACTTCTCA---AAAGAAGACATTTATGCAGCC 5644 |
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Sbjct 21463050 AAAAAATGGGGCTCAGAACTGAACAAAGAATTCTCACCTGAGGAATAC-CGAATG--GCA 21462994 Query 5645 AACAGACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACC 5704 |
Sbjct 21462993 GAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACA 21462934 Query 5705 ACAATGAGATACCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAAC 5764 |
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Sbjct 21462933 ACCCTGAGATTCCACCTCACACCAGTGAGAATGGCTAAGATCAAAAATTCAGGTGACAGC 21462874 Query 5765 AGGTGCTGGAGAGGATGTGGAGAAATAGGAACATTTTTACACTGTTGGTGGGACTGTAAA 5824 |
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Sbjct 21462873 AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGG 21462814 Query 5825 CTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTGGAAATA 5884 |
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Sbjct 21462813 CTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTA 21462754 Query 5885 CCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGC 5944 |
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Sbjct 21462753 CCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGA----AGCCCCAACTGG 21462698 Query 5945 T-ATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGCAAAGACTTG 6003 |
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Sbjct 21462697 TAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAACTG 21462638 Query 6004 GAACCAACCCAAATGTCTAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACAC 6063 |
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Sbjct 21462637 GAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACAC 21462578 Query 6064 CATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGAT 6123 |
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Sbjct 21462577 AATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGAT 21462518 Query 6124 GAAATTGGAAATCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCAT 6183 |
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Sbjct 21462517 GGACCTGGAGAGCATCATCCTGAGTGAGGTAACACAATCACAAAGGAACTCACACAATAT 21462458 Query 6184 ATTCTCACTCATAGGTGG 6201 |
Sbjct 21462457 GTACTCACTGATAAGTGG 21462440
Features flanking this part of subject sequence: 436814 bp at 5' side: tenascin C 663356 bp at 3' side: pregnancy-associated plasma protein A
Score = 1373 bits (1522), Expect = 0.0 Identities = 2610/3803 (68%), Gaps = 56/3803 (1%) Strand=Plus/Plus Query 2425 AATGGACTAAATGCTCCAATTAAAAGACACAGACTAGCAAATTGGATAAAGAGTCAAGAC 2484 |
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Sbjct 3747063 AATGGTCTCAACTCGCCAATAAAAAGACATAGACTAACAAACTGGCTACACAAACAAGAC 3747122 Query 2485 CCATCAGTGTGCTGTATTCAGGAAACCCATCTCACATGCAGAGACACACATAGGCTCAAA 2544 |
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Sbjct 3747123 CCAACATTTTGCTGCTTACAGGAAACTCATCTCAGAGAAAAAGATAGACACTACCTCAGA 3747182 Query 2545 ATAAAGGGATGGAGGAAGATCTACCAAGCAAACGGAAAACAAAAAAAGGCAGGGGTTGCA 2604 |
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Sbjct 3747183 ATGAAAGGCTGGAAAACAATTTTCCAAGCAAATGGTATGAAGAAACAAGCAGGAGTAGCC 3747242 Query 2605 ATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAG--ATCAAAAGAGACAAAGAAG 2662 |
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Sbjct 3747243 ATCCTAATATCTGATAAGATTGACTTCCAACC--CAAAGTCATCAAAAAAGACAAGGAGG 3747300 Query 2663 GCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATAT 2722 |
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Sbjct 3747301 GACACTTCATTCTCATCAAAGGTAAAATCCTCCAAGAGGAACTCTCAATTCTGAATATCT 3747360 Query 2723 ATGCACCCAATACAGGAGCACCAAGATTCA-TAAAGCAAGTCCTGAGTGACCTACAAAG- 2780 |
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Sbjct 3747361 ATGCTCCAAATACAAGAGCAGCCACATTCACTAAAGAAACT--TTAGTAAAGCTCAAAGC 3747418 Query 2781 AGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGA 2840 |
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Sbjct 3747419 ACACATTGCACCTCACACAATAATAGTGGGAGACTTCAACACACCACTTTCACCAATGGA 3747478 Query 2841 CAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCAGCA 2900 |
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Sbjct 3747479 CAGATCATGGAAACAGAAACTAAACAGGGACACACTGAAACTAACAGAAGTGATGAAACA 3747538 Query 2901 AGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTT 2960 |
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Sbjct 3747539 AATGGATCTGACAGATATCTACAGAACATTTTATCCTAAAACAAAAGGATATACCTTCTT 3747598 Query 2961 TTCAGCACCACACCACACCTACTCCAAAATTGACCACATACTGGGAAGTAAAGCACTCCT 3020 |
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Sbjct 3747599 CTCAGCACCTCATGGTACCTTCTCCAAAATTGACCACATAATAGGTCACAAATCAGGCCT 3747658 Query 3021 CAGCAAATGTAAAAGAACAGAAATTATAACAAACTATC-TCTCAGACCACAGTGCAATCA 3079 |
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Sbjct 3747659 CAACAGATGCAAAAATATTGAAATTGTCCCATG-TATCCTATCAGATCACCATGCACTAA 3747717 Query 3080 AACTAGAACT-CAGGATTAAGA-ATCTCACTCAAAACCGCTCAACTACATGGAAACTGAA 3137 |
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Sbjct 3747718 GGCT-GATCTTCAATAACAAAATAAATAACAGAAAGCCAA-CATTCACATGGAAACTGAA 3747775 Query 3138 CAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGTTGTT 3197 |
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Sbjct 3747776 CAACACTCTTCTCAATGATACCTTGGTCAAGGAAGGAATAAAGAAAGAAATTAAAGACTT 3747835 Query 3198 CTTTGAAACCAATGAGAACAAAGACACAACATACCAGAATCTCTGGGATGCATTCAAAGC 3257 |
Sbjct 3747836 TTTAGAGTTTAATGACAATGAAGCCACAACGTACCCAAACCTTTGGGACACAATGAAAGC 3747895 Query 3258 AGTGTGCAGAGGGAAATTTATAGCACTGAATGCCCACAAGAGAAAGCAGGAAAGATCCAA 3317 |
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Sbjct 3747896 ATTTCTAAGAGGGAAACTCATAGCTATGAGTGCCTTCAAGAAAAAACGGGAGAGAGCACA 3747955 Query 3318 AATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGA-GCAAACACATTCAA 3376 |
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Sbjct 3747956 TACTAGCAGCTTGACAACACATCTAAAAGCTCTAGAAAAAAAGGAAGCAAATTCACCCAA 3748015 Query 3377 AAGCTAGCAGAAGGGAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACAC 3436 |
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Sbjct 3748016 GAGG-AGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAA 3748074 Query 3437 AAAAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTTTTTTGAAAGGATAAACAAAA 3496 |
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Sbjct 3748075 GAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGA 3748134 Query 3497 TTGATAGACCGCTAGCAAGACTAA-TAAAGAAAAAAAGAGAGAAGAATCAAATAGATGCA 3555 |
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Sbjct 3748135 TAGATAAACCCTTAGCTAGACTCACTAAAGGGCACAGG-GACAAAATCCTAATTAACAAA 3748193 Query 3556 ATAAAAAAATGATAAAGGGGATATCACCACCAATCCCACAGAAATACAAACTACCATCAG 3615 |
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Sbjct 3748194 ATCAGAAA-TGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAG 3748252 Query 3616 AGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATT 3675 |
Sbjct 3748253 ATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATT 3748312 Query 3676 CCTGGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACC 3735 |
Sbjct 3748313 TCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCC 3748372 Query 3736 AATAACAGGAGCTGAAATTGTGGCAATAATCAATAGCTTACCAACCAAAAAGAGTCCAGG 3795 |
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Sbjct 3748373 CATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGG 3748432 Query 3796 ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCT 3855 |
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Sbjct 3748433 ACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCAGTTCT 3748492 Query 3856 TCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGACGC 3915 |
Sbjct 3748493 GCACAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAACTCATTTTATGAAGC 3748552 Query 3916 CAGCATCATTCTGATACCAAAGCCAGGCAGAGACACAACAAAAAAAGAGAATTTTAGACC 3975 |
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Sbjct 3748553 CACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACC 3748612 Query 3976 AATATCCTTGATGAACATTGAGGCAAAAATCCTCAATAAAACACTGGCAAAATGAATCCA 4035 |
Sbjct 3748613 AATTTCTCTTATGAACATCGATGCAAAAATTCTTAATAAAATTCTCGCTAACCGAATCCA 3748672 Query 4036 GCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG 4095 |
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Sbjct 3748673 AGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGG 3748732 Query 4096 CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATAAAAACAGAGCCAAAGACAA 4155 |
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Sbjct 3748733 ATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAA 3748792 Query 4156 AAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTT 4215 |
Sbjct 3748793 AAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATT 3748852 Query 4216 CATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGC 4275 |
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Sbjct 3748853 CATGATAAAAGTTCTGGAAAGATCAGGAATTCAAGGCCAATACCTAAACATGATAAAAGC 3748912 Query 4276 TATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCTC 4335 |
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Sbjct 3748913 AATCTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCC 3748972 Query 4336 TTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTT 4395 |
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Sbjct 3748973 ACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACT 3749032 Query 4396 GGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAA 4455 |
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Sbjct 3749033 TGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAA 3749092 Query 4456 AGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATATCTAGAAAACCCCAT 4515 |
Sbjct 3749093 AGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAA 3749152 Query 4516 TGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAA 4575 |
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Sbjct 3749153 AAATTCCAACAGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAA 3749212 Query 4576 AATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCA 4635 |
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Sbjct 3749213 AATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGA 3749272 Query 4636 AATCA-TGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCC 4694 |
Sbjct 3749273 AATTAGGGAAACAACACCC-TTCTCAATAGCCACAAATAATATAAAATATCTCGGCGTGA 3749331 Query 4695 AACTTACAAGGGATGTGAAGGGCCTCTTCAAGGAGAACTACAAACCTCTGCTCAAGGAAA 4754 |
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Sbjct 3749332 CTCTAACGAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAGTCCCTGAAGAAAGAAA 3749391 Query 4755 TAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATA 4814 |
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Sbjct 3749392 TTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAACA 3749451 Query 4815 TCGTGAAAATGGCCATACTCCTCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGC 4874 |
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Sbjct 3749452 TTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATTAAAA 3749511 Query 4875 TACCAATGACTTTCTTCACAGAACTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAA 4934 |
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Sbjct 3749512 TTCCAACTCAATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAACA 3749571 Query 4935 AGAGAGCCCACATCGCCAAGTCAATCCT--AAGCCAAAAGAACAAAGCTGGAGGCATCAC 4992 |
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Sbjct 3749572 AAAAACCGAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAAC--CTCTGGTGGAATCAC 3749629 Query 4993 ACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTA 5052 |
Sbjct 3749630 CATGCCTGACCTCAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTA 3749689 Query 5053 CCAAAACAGAGATATTGATCAATGGAACAGAACAGGGCCCTCAGAAATAACGCCGCATAT 5112 |
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Sbjct 3749690 TAGAGACAGACAAGTGGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACAC 3749749 Query 5113 CTACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCT 5172 |
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Sbjct 3749750 CTATGGTCACTTGATCTTCGACAAGGGAGCCAAAACCATCCAGTGGAAGAAAGACAGCAT 3749809 Query 5173 ATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCAT-ATGTAGAAAGCTGAAACTGGATC 5231 |
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Sbjct 3749810 TTTCAACAATTGGTGCTGGCACAACTGG-TTGTTATCATGTAGAAGAATGCGAATCGATC 3749868 Query 5232 CCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGAGTTAAACGTTAGAC 5291 |
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Sbjct 3749869 CATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC 3749928 Query 5292 CTAAAACCATAAAAACCCTAGAAGAAAACGTAGGCATTACCATTCAGGACATAGGCATGG 5351 |
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Sbjct 3749929 CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAG 3749988 Query 5352 GCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGC---AAC---AAAAGACAAAATTG 5405 |
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Sbjct 3749989 GGGAAAAATTCCTG-----AACA-GAACAGCAATGGCTTGTACTGTAAGATCGAGAATTG 3750042 Query 5406 ACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACT-ACCATCAGA 5464 |
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Sbjct 3750043 ACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATAAGA 3750102 Query 5465 GTGAACAGGCAACCTACAAAATGGGAGAAAATTTTTGC--AACCTACTCATCTGACAAAG 5522 |
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Sbjct 3750103 -CAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTA--AATCAGATAGGG 3750159 Query 5523 GGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACC 5582 |
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Sbjct 3750160 GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACC 3750219 Query 5583 CCATCAAAAAGTGGGTGAAGGACATGAACAGACACTTCTCA---AAAGAAGACATTTATG 5639 |
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Sbjct 3750220 CCCTTAAAAAATGGGGCTCAGAACTGAACAAAGAATTCTCACCTGAGGAATAC-CGAATG 3750278 Query 5640 CAGCCAACAGACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCA 5699 |
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Sbjct 3750279 --GCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCA 3750336 Query 5700 AAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAA 5759 |
Sbjct 3750337 AAACAACCCTGAGATTCCACCTCACACCAGTGAGAATGGCTAAGATCAAAAATTCAGGTG 3750396 Query 5760 ACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACATTTTTACACTGTTGGTGGGACT 5819 |
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Sbjct 3750397 ACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATT 3750456 Query 5820 GTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTGG 5879 |
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Sbjct 3750457 GCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAG 3750516 Query 5880 AAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCAT 5939 |
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Sbjct 3750517 TACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGA----AGCCCCA 3750572 Query 5940 GCTGCT-ATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGCAAAG 5998 |
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Sbjct 3750573 ACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGA 3750632 Query 5999 ACTTGGAACCAACCCAAATGTCTAACAATGATAGACTGGATTAAGAAAATGTGGCACATA 6058 |
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Sbjct 3750633 AACTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATC 3750692 Query 6059 TACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACA 6118 |
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Sbjct 3750693 TACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAA 3750752 Query 6119 TGGATGAAATTGGAAATCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACAC 6178 |
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Sbjct 3750753 TGGATGGACCTGGAGAGCATCATCCTGAGTGAGGTAACACAATCACAAAGGAACTCACAC 3750812 Query 6179 CGCATATTCTCACTCATAGGTGG 6201 |
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Sbjct 3750813 AATATGTACTCACTGATAAGTGG 3750835
Features flanking this part of subject sequence: 447385 bp at 5' side: solute carrier family 24 (sodium/potassium/calcium exchan... 95043 bp at 3' side: myeloid/lymphoid or mixed lineage-leukemia translocation ...
Score = 1373 bits (1522), Expect = 0.0 Identities = 2605/3797 (68%), Gaps = 44/3797 (1%) Strand=Plus/Minus Query 2425 AATGGACTAAATGCTCCAATTAAAAGACACAGACTAGCAAATTGGATAAAGAGTCAAGAC 2484 |
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Sbjct 26953491 AATGGTCTCAACTCGCCAATAAAAAGACATAGACTAACAAACTGGCTACACAAACAAGAC 26953432 Query 2485 CCATCAGTGTGCTGTATTCAGGAAACCCATCTCACATGCAGAGACACACATAGGCTCAAA 2544 |
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Sbjct 26953431 ACAACATTTTGCTGCTTACAGGAAACTCATCTCAGAGAAAAAGATAGACACTACCTCAGA 26953372 Query 2545 ATAAAGGGATGGAGGAAGATCTACCAAGCAAACGGAAAACAAAAAAAGGCAGGGGTTGCA 2604 |
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Sbjct 26953371 ATGAAAGGCTGGAAAACAATTTTCCAAGCAAATGGTATGAAGAAACAAGCAGGAGTAGCC 26953312 Query 2605 ATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAG--ATCAAAAGAGACAAAGAAG 2662 |
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Sbjct 26953311 ATCCTAATATCTGATAAGATTGACTTCCAACC--CAAAGTCATCAAAAAAGACAAGGAGG 26953254 Query 2663 GCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATAT 2722 |
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Sbjct 26953253 GACACTTCATTCTCATCAAAGGTAAAATCCTCCAAGAGGAACTCTCAATTCTGAATATCT 26953194 Query 2723 ATGCACCCAATACAGGAGCACCAAGATTCA-TAAAGCAAGTCCTGAGTGACCTACAAAG- 2780 |
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Sbjct 26953193 ATGCTCCAAATACAAGAGCAGCCACATTCACTAAAGAAACT--TTAGTAAAGCTCAAAGC 26953136 Query 2781 AGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGA 2840 |
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Sbjct 26953135 ACACATTGCGCCTCACACAATAATAGTGGGAGACTTCAACACACCACTTTCACCAATGGA 26953076 Query 2841 CAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCAGCA 2900 |
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Sbjct 26953075 CAGATCATGGAAACAGAAACTAAACAGGGACACACTGAAACTAACAGAAGTGATGAAACA 26953016 Query 2901 AGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTT 2960 |
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Sbjct 26953015 AATGGATCTGACAGATATCTACAGAACATTTTACCCTAAAACAAAAGGATATACCTTCTT 26952956 Query 2961 TTCAGCACCACACCACACCTACTCCAAAATTGACCACATACTGGGAAGTAAAGCACTCCT 3020 |
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Sbjct 26952955 CTCAGCACCTCATGGTACCTTCTCCAAAATTGACCACATAATAGGTCACAAATCAGGCCT 26952896 Query 3021 CAGCAAATGTAAAAGAACAGAAATTATAACAAACTATC-TCTCAGACCACAGTGCAATCA 3079 |
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Sbjct 26952895 CAACAGATTCAAAAATATTGAAATTGTCCCATG-TATCCTATCAGATCACCATGCACTAA 26952837 Query 3080 AACTAGAACT-CAGGATTAAGA-ATCTCACTCAAAACCGCTCAACTACATGGAAACTGAA 3137 |
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Sbjct 26952836 GGCT-GATCTTCAATAACAAAATAAATAACAGAAAGCCAA-CATTCACATGGAAACTGAA 26952779 Query 3138 CAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGTTGTT 3197 |
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Sbjct 26952778 CAACACTCTTCTCAATGATACCTTGGTCAAGGAAGGAATAAAGAAAGAAATTAAAGACTT 26952719 Query 3198 CTTTGAAACCAATGAGAACAAAGACACAACATACCAGAATCTCTGGGATGCATTCAAAGC 3257 |
Sbjct 26952718 TTTAGAGTTTAATGAAAATGAAGCCACAACGTACCCAAACCTTTGGGACACAATGAAAGC 26952659 Query 3258 AGTGTGCAGAGGGAAATTTATAGCACTGAATGCCCACAAGAGAAAGCAGGAAAGATCCAA 3317 |
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Sbjct 26952658 ATTTCTAAGAGGGAAACTCATAGCTATGAGTGCCTTCAAGAAAAAACGGGAGAGAGCACA 26952599 Query 3318 AATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGA-GCAAACACATTCAA 3376 |
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Sbjct 26952598 TACTAGCAGCTTGACAACACATCTAAAAGCTCTAGAAAAAAAGGAAGCAAATTCACCCAA 26952539 Query 3377 AAGCTAGCAGAAGGGAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACAC 3436 |
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Sbjct 26952538 GAGG-AGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAA 26952480 Query 3437 AAAAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTTTTTTGAAAGGATAAACAAAA 3496 |
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Sbjct 26952479 GAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGA 26952420 Query 3497 TTGATAGACCGCTAGCAAGACTAA-TAAAGAAAAAAAGAGAGAAGAATCAAATAGATGCA 3555 |
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Sbjct 26952419 TAGATAAACCCTTAGCTAGACTCACTAAAGGGCACAGG-GACAAAATCCTAATTAACAAA 26952361 Query 3556 ATAAAAAAATGATAAAGGGGATATCACCACCAATCCCACAGAAATACAAACTACCATCAG 3615 |
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Sbjct 26952360 ATCAGAAA-TGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAG 26952302 Query 3616 AGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATT 3675 |
Sbjct 26952301 ATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATT 26952242 Query 3676 CCTGGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACC 3735 |
Sbjct 26952241 TCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCC 26952182 Query 3736 AATAACAGGAGCTGAAATTGTGGCAATAATCAATAGCTTACCAACCAAAAAGAGTCCAGG 3795 |
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Sbjct 26952181 CATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGG 26952122 Query 3796 ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCT 3855 |
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Sbjct 26952121 ACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCAGTTCT 26952062 Query 3856 TCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGACGC 3915 |
Sbjct 26952061 GCACAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAACTCATTTTATGAAGC 26952002 Query 3916 CAGCATCATTCTGATACCAAAGCCAGGCAGAGACACAACAAAAAAAGAGAATTTTAGACC 3975 |
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Sbjct 26952001 CACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACC 26951942 Query 3976 AATATCCTTGATGAACATTGAGGCAAAAATCCTCAATAAAACACTGGCAAAATGAATCCA 4035 |
Sbjct 26951941 AATTTCTCTTATGAACATCGATGCAAAAATCCTTAATAAAATTCTCGCTAACCGAATCCA 26951882 Query 4036 GCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG 4095 |
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Sbjct 26951881 AGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGG 26951822 Query 4096 CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATAAAAACAGAGCCAAAGACAA 4155 |
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Sbjct 26951821 ATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAA 26951762 Query 4156 AAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTT 4215 |
Sbjct 26951761 AAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATT 26951702 Query 4216 CATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGC 4275 |
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Sbjct 26951701 CATGATAAAAGTTCTGGAAAGATCAGGAATTCAAGGCCAATACCTAAACATGATAAAAGC 26951642 Query 4276 TATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCTC 4335 |
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Sbjct 26951641 AATCTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCC 26951582 Query 4336 TTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTT 4395 |
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Sbjct 26951581 ACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACT 26951522 Query 4396 GGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAA 4455 |
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Sbjct 26951521 TGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAA 26951462 Query 4456 AGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATATCTAGAAAACCCCAT 4515 |
Sbjct 26951461 AGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAA 26951402 Query 4516 TGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAA 4575 |
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Sbjct 26951401 AAATTCCAACAGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAA 26951342 Query 4576 AATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCA 4635 |
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Sbjct 26951341 AATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGA 26951282 Query 4636 AATCA-TGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCC 4694 |
Sbjct 26951281 AATTAGGGAAACAACACCC-TTCTCAATAGCCACAAATAATATAAAATATCTCGGCGTGA 26951223 Query 4695 AACTTACAAGGGATGTGAAGGGCCTCTTCAAGGAGAACTACAAACCTCTGCTCAAGGAAA 4754 |
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Sbjct 26951222 CTCTAACGAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAGTCCCTGAAGAAAGAAA 26951163 Query 4755 TAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATA 4814 |
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Sbjct 26951162 TTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAACA 26951103 Query 4815 TCGTGAAAATGGCCATACTCCTCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGC 4874 |
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Sbjct 26951102 TTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATTAAAA 26951043 Query 4875 TACCAATGACTTTCTTCACAGAACTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAA 4934 |
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Sbjct 26951042 TTCCAACTCAATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAACA 26950983 Query 4935 AGAGAGCCCACATCGCCAAGTCAATCCT--AAGCCAAAAGAACAAAGCTGGAGGCATCAC 4992 |
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Sbjct 26950982 AAAAACCGAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAAC--CTCTGGTGGAATCAC 26950925 Query 4993 ACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTA 5052 |
Sbjct 26950924 CATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTA 26950865 Query 5053 CCAAAACAGAGATATTGATCAATGGAACAGAACAGGGCCCTCAGAAATAACGCCGCATAT 5112 |
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Sbjct 26950864 TAGAGACAGACAAGTGGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACAC 26950805 Query 5113 CTACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCT 5172 |
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Sbjct 26950804 CTATGGTCACTTGATCTTCGACAAGGGAGCCAAAACCATCCAGTGGAAGAAAGACACCAT 26950745 Query 5173 ATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCAT-ATGTAGAAAGCTGAAACTGGATC 5231 |
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Sbjct 26950744 TTTCAACAATTGGTGCTGGCACAACTGG-TTGTTATCATGTAGAAGAATGCGAATCGATC 26950686 Query 5232 CCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGAGTTAAACGTTAGAC 5291 |
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Sbjct 26950685 CATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC 26950626 Query 5292 CTAAAACCATAAAAACCCTAGAAGAAAACGTAGGCATTACCATTCAGGACATAGGCATGG 5351 |
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Sbjct 26950625 CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAG 26950566 Query 5352 GCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAAT 5411 |
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Sbjct 26950565 GGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAAT 26950506 Query 5412 GGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACT-ACCATCAGAGTGAAC 5470 |
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Sbjct 26950505 GGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATAAGA-CAAAA 26950447 Query 5471 AGGCAACCTACAAAATGGGAGAAAATTTTTGC--AACCTACTCATCTGACAAAGGGCTAA 5528 |
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Sbjct 26950446 AGACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTA--AATCAGATAGGGGACTAA 26950389 Query 5529 TATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCA 5588 |
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Sbjct 26950388 TATCCAACATATATAAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTA 26950329 Query 5589 AAAAGTGGGTGAAGGACATGAACAGACACTTCTCA---AAAGAAGACATTTATGCAGCCA 5645 |
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Sbjct 26950328 AAAAATGGGGCTCAGAACTGAACAAAGAATTCTCACCTGAGGAATAC-CGAATG--GCAG 26950272 Query 5646 ACAGACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCA 5705 |
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Sbjct 26950271 AGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAA 26950212 Query 5706 CAATGAGATACCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACA 5765 |
Sbjct 26950211 CCCTGAGATTCCACCTCACACCAGTGAGAATGGCTAAGATCAAAAATTCAGGTGACAGCA 26950152 Query 5766 GGTGCTGGAGAGGATGTGGAGAAATAGGAACATTTTTACACTGTTGGTGGGACTGTAAAC 5825 |
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Sbjct 26950151 GATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGC 26950092 Query 5826 TAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTGGAAATAC 5885 |
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Sbjct 26950091 TTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTAC 26950032 Query 5886 CATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCT 5945 |
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Sbjct 26950031 CGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGA----AGCCCCAACTGGT 26949976 Query 5946 -ATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGCAAAGACTTGG 6004 |
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Sbjct 26949975 AAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAACTGG 26949916 Query 6005 AACCAACCCAAATGTCTAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACC 6064 |
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Sbjct 26949915 AAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACA 26949856 Query 6065 ATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATG 6124 |
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Sbjct 26949855 ATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATG 26949796 Query 6125 AAATTGGAAATCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATA 6184 |
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Sbjct 26949795 GACCTGGAGAGCATCATCCTGAGTGAGGTAACACAATCACAAAGGAACTCACACAATATG 26949736 Query 6185 TTCTCACTCATAGGTGG 6201 |
Sbjct 26949735 TACTCACTGATAAGTGG 26949719
and that's not all. So what does that mean? the sequence is a really, really common one at this level of identity? (Chr4 is the 4th, after equal similitude to parts of chr15 for example).
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