2/3/10
Revising the excel spreadsheet created last week with the data
- I went through and revised the excel spreadsheet with all of the data in order to eliminate the information that was not necessary and keep the information that was.
- The following columns were kept
- Probe set ID
- Archival UniGene Cluster
- UniGene ID
- Gene Symbol
- Chromosomal location
- Ensembl
- EntrezGene
- SwissProt
- RegSeq Protein
- RegSeq Transcription
- MGI Name
- All of the expression values
Organizing the data
- Organized the expression values by grouping the three replicates together for each of the three testing groups (TRAMP water. TRAMP GTC, WT)
- Made it so that all of the weeks were grouped together as well
Calculating averages
- Calculated average expression values for the three replicates for each treatment method for each of the three weeks
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Nutrigenomics
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