User:Deepak Singh

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Contact Info

Deepak Singh (an artistic interpretation)

Hobby scientist and open data advocate.


The following are projects that I am involved with in one way or another


  • 2000, PhD Chemistry, Syracuse University
  • 1996, MSc Physical Chemistry, Indian Institute of Technology - Bombay
  • 1994, BSc Chemistry, Hindu College, Delhi University

Research interests

  1. Molecular Modeling
  2. Bioinformatics
  3. Semantic Web


  1. Singh D, Hudson BS, Middleton C, and Birge RR. Conformation and orientation of the retinyl chromophore in rhodopsin: a critical evaluation of recent NMR data on the basis of theoretical calculations results in a minimum energy structure consistent with all experimental data. Biochemistry. 2001 Apr 10;40(14):4201-4. DOI:10.1021/bi001911o | PubMed ID:11284674 | HubMed [Paper1]
  2. Kusnetzow A, Singh DL, Martin CH, Barani IJ, and Birge RR. Nature of the chromophore binding site of bacteriorhodopsin: the potential role of Arg82 as a principal counterion. Biophys J. 1999 May;76(5):2370-89. DOI:10.1016/S0006-3495(99)77394-7 | PubMed ID:10233056 | HubMed [Paper2]
  3. Kusnetzow A, Dukkipati A, Babu KR, Singh D, Vought BW, Knox BE, and Birge RR. The photobleaching sequence of a short-wavelength visual pigment. Biochemistry. 2001 Jul 3;40(26):7832-44. DOI:10.1021/bi010387y | PubMed ID:11425310 | HubMed [Paper3]

All Medline abstracts: PubMed | HubMed

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