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20.20(S11):Advanced topics: Difference between revisions
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| '''Transcription-based Logic Devices'''<br> | | '''Transcription-based Logic Devices'''<br> | ||
| Wed Feb 16 | | Wed Feb 16 | ||
| | | Pei-Ann | ||
|'''Environmental signal integration by a modular AND gate'''<br> Anderson JC, Voigt C, Arkin, AP ''Molecular systems biology'' (2007) 3:133 <br>[[PMID: 17700541]] | |'''Environmental signal integration by a modular AND gate'''<br> Anderson JC, Voigt C, Arkin, AP ''Molecular systems biology'' (2007) 3:133 <br>[[PMID: 17700541]] | ||
|'''A synthetic oscillatory network of transcriptional regulators'''<br>Elowitz, MB, and Leibler, S. ''Nature'' (2000) 403, | |'''A synthetic oscillatory network of transcriptional regulators'''<br>Elowitz, MB, and Leibler, S. ''Nature'' (2000) 403, | ||
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|'''Protein Design: directed evolution'''<br> | |'''Protein Design: directed evolution'''<br> | ||
| Wed Feb 23 | | Wed Feb 23 | ||
| | | Amber | ||
|'''De Novo Designed Proteins from a Library of Artificial Sequences Function in Esherichia Coli and Enable Cell Growth''' <br>Fisher MA, et al. ''PLoS One'' (2011)6(1):e15364<br>[[DOI: 10.1371/journal.pone.0015364]] | |'''De Novo Designed Proteins from a Library of Artificial Sequences Function in Esherichia Coli and Enable Cell Growth''' <br>Fisher MA, et al. ''PLoS One'' (2011)6(1):e15364<br>[[DOI: 10.1371/journal.pone.0015364]] | ||
|'''Directed evolution of recombinase specificity by split gene reassembly''' <br>Gersbach, CA, et al. ''NAR'' (2010) 38(12): 4198-4206-1543 <br> [[DOI: 10.1093/nar/gkq125]] | |'''Directed evolution of recombinase specificity by split gene reassembly''' <br>Gersbach, CA, et al. ''NAR'' (2010) 38(12): 4198-4206-1543 <br> [[DOI: 10.1093/nar/gkq125]] | ||
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|'''RNA Engineering'''<br> | |'''RNA Engineering'''<br> | ||
| Wed Mar 2 | | Wed Mar 2 | ||
| | | Colin or Raven | ||
| '''Reprogramming Cellular Behavior with RNA Controllers Responsive to Endogenous Proteins'''<br>Culler, SJ, Hoff, KG, Smolke, CD. ''Science'' (2010) 330:1251-1255 <br>[[DOI: 10.1126/science.1192128]] | | '''Reprogramming Cellular Behavior with RNA Controllers Responsive to Endogenous Proteins'''<br>Culler, SJ, Hoff, KG, Smolke, CD. ''Science'' (2010) 330:1251-1255 <br>[[DOI: 10.1126/science.1192128]] | ||
| '''The Case for RNA''' <br>Chang, CL, Arkin AP. ''Science'' (2010) 330:1185-1186<br>[[DOI: 10.1126/science.1199495]] | | '''The Case for RNA''' <br>Chang, CL, Arkin AP. ''Science'' (2010) 330:1185-1186<br>[[DOI: 10.1126/science.1199495]] | ||
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| '''Tuning the system: Network Composition''' <br> | | '''Tuning the system: Network Composition''' <br> | ||
| <font color = blue> Thursday Mar 10</font color> | | <font color = blue> Thursday Mar 10</font color> | ||
| | | Colin or Raven | ||
| '''A modular positive feedback-based gene amplifier''' Nistala GJ et al. ''JBE'' (2010) 4:4<br>[[DOI: 10.1186/1754-1611-4-4]] | | '''A modular positive feedback-based gene amplifier''' Nistala GJ et al. ''JBE'' (2010) 4:4<br>[[DOI: 10.1186/1754-1611-4-4]] | ||
|'''A fast, robust and tunable synthetic gene oscillator''' <br>Stricker, J. et al. ''Nature'' (2008) 456, 516–519<br>[[PMID: 18971928]] | |'''A fast, robust and tunable synthetic gene oscillator''' <br>Stricker, J. et al. ''Nature'' (2008) 456, 516–519<br>[[PMID: 18971928]] | ||
| Line 80: | Line 80: | ||
| '''(re)Programming Systems''' <br> | | '''(re)Programming Systems''' <br> | ||
| Wed Mar 16 | | Wed Mar 16 | ||
| | | Patrick | ||
| '''Highly Efficient Reprogramming to Pluripotency and Directed Differentiation of Human Cells with Synthetic Modified mRNA''' Warren L, et al. ''Cell Stem Cell'' (2010) 7:618-630<br>[[DOI:10.1016/j.stem.2010.08.012]] | | '''Highly Efficient Reprogramming to Pluripotency and Directed Differentiation of Human Cells with Synthetic Modified mRNA''' Warren L, et al. ''Cell Stem Cell'' (2010) 7:618-630<br>[[DOI:10.1016/j.stem.2010.08.012]] | ||
| '''Reprogramming bacteria to seek and destroy an herbicide''' <br>Sinha, J. et al. ''Nature Chemical Biology'' (2010)6: 464–470<br>[[doi:10.1038/nchembio.369]] | | '''Reprogramming bacteria to seek and destroy an herbicide''' <br>Sinha, J. et al. ''Nature Chemical Biology'' (2010)6: 464–470<br>[[doi:10.1038/nchembio.369]] | ||
