Richard Lab:Restriction Digest: Difference between revisions

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*If you're not getting good digestion it might be because your enzyme is bad.  Double the digestion time and see.
*If you're not getting good digestion it might be because your enzyme is bad.  Double the digestion time and see.
*Longer digest gives more complete digestion, especially if you have >1µg of DNA, but can sometimes give nonspecific digestion
*Longer digest gives more complete digestion, especially if you have >1µg of DNA, but can sometimes give nonspecific digestion
*Beware the the NEB double digest chart.  For EcoRI and PstI double digest it recommends using the EcoRI NEBuffer.  However based on my digests both NEBuffer 2 and 3 work better; with NEBuffer 2 giving the most complete double digestion.  It is funny that thye recommend the Eco buffer because they also say that Pst only exhibits 50% activity with that buffer.
*Beware the the NEB double digest chart.  For EcoRI and PstI double digest it recommends using the EcoRI NEBuffer.  However based on my digests both NEBuffer 2 and 3 work better; with NEBuffer 2 giving the most complete double digestion.  It is funny that they recommend the EcoRI buffer because their chart also says that PstI is only 50% active in that buffer.


==References==
==References==
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