Physics307L F08

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Physics 307L, Fall 2008

070411 307L.png

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Winter Break Lab Fest       


This is the homepage (wiki) for Physics 307L at the University of New Mexico.

This site is hosted on OpenWetWare. Many of the links on the left (such as "Main Page") will take you to other OWW pages. Any page that begins with "Physics307L F08" is a page we have created specifically for this course. Everything we do for the course, except confidential letter grades, are carried out in public on this wiki. This includes primary lab notebooks, summaries, formal report rough and final drafts, and all of the instructor feedback. Thus, we're carrying out open science and we're enjoying it. One of the best results of this open science course is that students have been reading and citing each other's work and learning how to be open scientists at a very early point in their careers.

If you're a visitor to the course and wondering how it works, here are some suggested links

  • Physics307L F08:People. Since this is an open science course, the people in the course are the most important part and they create the content. From this page, you can click on a student's "my page for the course" to find their notebook, summaries, and formal reports. Most of the students have created a bunch of very good work to look at. Here is a link to one of the best students: Physics307L F08:People/Klimov
  • Course Goals. These goals need to be revised, but you can get an idea of what we're trying to achieve here.

Course times

Lecture:           Mondays    1:00 to 1:50 pm P&A room 184
Labs (choose one): Mondays    2:00 to 4:50 pm P&A room 116
                   Wednesdays 2:00 to 4:50 P&A room 116

Syllabus

See the Prof. Gold's lab manual for information about the experiments

The Fall 2008 Physics 307L course (led by Dr. Koch) will be an evolution of the previous semesters led by Dr. Gold. You can find a wealth of information on his website for the course. The experiments offered are likely to be the same as those offered in previous years. (See Schedule for list of experiments.) Any significant changes will be discussed during the first class meeting.

See the Physics and Astronomy website for information on how to register

P&A Fall 2008 Schedule

Recent updates to the course

List of abbreviations:
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26 October 2020

     23:07  TMPRSS2 Lab Notebook‎‎ 19 changes history +2,826 [Erykah I Walton‎; Mking44‎ (6×); Jessica A. DaMota‎ (6×); Adinulos‎ (6×)]
     
23:07 (cur | prev) +612 Erykah I Walton talk contribs →‎Exon SNPs
     
22:31 (cur | prev) +145 Jessica A. DaMota talk contribs →‎Exon 11: updated caption with information about frameshift variants.
     
22:23 (cur | prev) +148 Jessica A. DaMota talk contribs →‎Exon 8: uploaded exon 8 image along with caption.
     
22:19 (cur | prev) +291 Jessica A. DaMota talk contribs →‎Exon 9: uploaded 3 images for exon 9 along with caption
     
22:02 (cur | prev) +157 Jessica A. DaMota talk contribs →‎Exon 10: Uploaded image of exon 10 along with caption
     
21:56 (cur | prev) +44 Jessica A. DaMota talk contribs →‎Exon 11: updated image with one that showed frameshift variants and missense variations, updated caption.
     
21:36 (cur | prev) +121 Jessica A. DaMota talk contribs →‎Exon 11: added image with caption
     
20:59 (cur | prev) +1 Adinulos talk contribs →‎Exon 2: fixed format
     
20:59 (cur | prev) +144 Adinulos talk contribs →‎Exon 4: added exon 4 description
     
20:57 (cur | prev) +192 Adinulos talk contribs →‎Exon 3: added exon 3 snp descriptions
     
20:50 (cur | prev) +171 Adinulos talk contribs →‎Exon 2: added description of exon snps
     
20:37 (cur | prev) +116 Adinulos talk contribs →‎Exon 1: added description of exon 1
     
20:35 (cur | prev) +117 Adinulos talk contribs →‎Exon SNPs: added exon snps 1-4 images
     
17:33 (cur | prev) +152 Mking44 talk contribs →‎Exon 14: added description
     
17:26 (cur | prev) +85 Mking44 talk contribs →‎Exon 13: updated
     
17:24 (cur | prev) +60 Mking44 talk contribs →‎Exon 12: modified to include missense
     
17:18 (cur | prev) +128 Mking44 talk contribs →‎Exon 14: added exon 14
     
17:14 (cur | prev) +1 Mking44 talk contribs →‎Exon 13: fixed formatting
     
17:14 (cur | prev) +141 Mking44 talk contribs →‎Exon 13: added exon 13
     22:55  (Upload log) [Kam Taghizadeh‎; Mking44‎ (3×); Erykah I Walton‎ (4×); Adinulos‎ (4×); Jessica A. DaMota‎ (8×)]
     
22:55 Erykah I Walton talk contribs uploaded File:Exon 8 EWalton.png(Exon 8 of Tmprss2 with 9 missense variations and 0 frameshift variations.)
     
22:53 Erykah I Walton talk contribs uploaded File:Exon 7 EWalton.png(Exon 7 of Tmprss2 with many missense variations and 2 frameshift variations.)
     
22:52 Erykah I Walton talk contribs uploaded File:Exon 6 EWalton.png(Exon 6 of Tmprss2 with many missense variations and 1 frameshift variation.)
     
22:51 Erykah I Walton talk contribs uploaded File:Exon 5 EWalton.png(Exon 5 of Tmprss2 with missense and frameshift variations.)
     
22:21 Jessica A. DaMota talk contribs uploaded File:Exon8 DaMota.png(Exon 8 of TMPRSS2 showing missense and frameshift variations.)
     
22:17 Jessica A. DaMota talk contribs uploaded File:Exon9c DaMota.png(Exon 9c of TMPRSS2 showing missense variations.)
     
22:16 Jessica A. DaMota talk contribs uploaded File:Exon9b DaMota.png(Exon 9b of TMPRSS2 showing missense variations.)
     
22:15 Jessica A. DaMota talk contribs uploaded File:Exon9a DaMota.png(Exon 9a of TMPRSS2 showing missense variations)
     
21:59 Jessica A. DaMota talk contribs uploaded File:Exon10 DaMota.png(Exon 10 of TMPRSS2 showing SNP variants.)
     
21:54 Jessica A. DaMota talk contribs uploaded File:Exon11 DaMota.png(Exon 11 showing missense and frameshift variants.)
     
21:51 Jessica A. DaMota talk contribs uploaded File:DaMota Exon11v.png(Exon 11 showing missense and frameshift variants)
     
21:29 Jessica A. DaMota talk contribs uploaded File:DaMota Exon11.png(Exon 11 as viewed in Genome Browser from NCBI.)
     
20:32 Adinulos talk contribs uploaded File:ADExon4.png(uploaded TMPRSS2 exon 4 snps)
     
20:31 Adinulos talk contribs uploaded File:ADExon3.png(uploaded TMPRSS2 exon 3 snps)
     
20:31 Adinulos talk contribs uploaded File:ADExon2.png(uploaded TMPRSS2 exon 2 snps)
     
20:30 Adinulos talk contribs uploaded File:AD Exon 1.png(Uploaded TMPRSS2 Exon 1 snps)
     
19:44 Kam Taghizadeh talk contribs uploaded File:Ktag search query.png
     
17:25 Mking44 talk contribs uploaded File:Exon 13 TMPRSS2 Madeleine King updated.PNG
     
17:22 Mking44 talk contribs uploaded a new version of File:Exon 12 TMPRSS2 Madeleine King.PNG
     
17:17 Mking44 talk contribs uploaded File:Exon 14 TMPRSS2 Madeleine King.PNG
     19:47  BacFITBase Review‎‎ 11 changes history +2,678 [Kam Taghizadeh‎ (11×)]
     
19:47 (cur | prev) +32 Kam Taghizadeh talk contribs added last bullet point
     
19:46 (cur | prev) +7 Kam Taghizadeh talk contribs added photo
     
19:45 (cur | prev) +1,026 Kam Taghizadeh talk contribs added more answers and image
     
19:32 (cur | prev) +22 Kam Taghizadeh talk contribs added when it was last updated
     
19:26 (cur | prev) -11 Kam Taghizadeh talk contribs deleted word
     
19:25 (cur | prev) +1,241 Kam Taghizadeh talk contribs added more answers
     
18:54 (cur | prev) +88 Kam Taghizadeh talk contribs added part of answer
     
18:35 (cur | prev) +84 Kam Taghizadeh talk contribs added rest of questions and answers
     
18:31 (cur | prev) +105 Kam Taghizadeh talk contribs added who maintains database
     
17:49 (cur | prev) +1 Kam Taghizadeh talk contribs added space
     
17:49 (cur | prev) +83 Kam Taghizadeh talk contribs added link to database