IGEM:IMPERIAL/2009/M3/Modelling/analysis/1/legend

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The E.ncapsulator: the disease killer

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Legend

Term Variable/Parameter Meaning/description
E Variable Restriction enzymes DpnII or TaqI
kE Parameter Rate of translation of restriction enzymes DpnII or TaqI
mE Variable mRNA of restriction enzymes
dE Parameter Rate of degradation of restriction enzymes
dmE Parameter Rate of degradation of mRNA of restriction enzyme
mcI Variable mRNA of cI protein
kmcI Parameter rate of transcription of mRNA of cI protein
dmcI Parameter Rate of degradation of mRNA of cI protein
cI Variable Protein cI
kcI Parameter Rate of translation of cI protein
T Variable Temperature
D Variable Amount of dead E. coli
N Variable Amount of live E. coli
g Parameter Growth constant for E. coli/td>
d Parameter Death constant for E. coli
nt Parameter Hill coefficient for thermal induction
Knt Parameter Threshold for the hill function of thermal induction
nm Parameter Hill coefficient for rate of production of mRNA of restriction enzymes
ncI Parameter Hill coefficient for concentration of cI protein
Knm Parameter Threshold for the hill function of the production of mRNA of restriction enzymes
Kme Parameter Threshold of hill function for cell death
ne Parameter Hill coefficient for rate of cell killing
k1 Parameter Rate of translation of restriction enzymes
k2 Parameter Constant in hill function of restriction enzymes, for cell death


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