GRNmap Testing Report Identical Runs with Same Code Version and Same Input Workbook 2015-06-01

Test Conditions

• Date: 2015-06-02
• Test Performed by: Tessa A. Morris, Electronic Notebook
• Code Version: Current version of GRNmap-beta as of 2:30 pm 2015-06-02
• MATLAB Version: 2014b
• Computer on which the model was run: Row 2 4th from door

Purpose

• The purpose of this test was to compare successive identical runs with same version code and same input workbook to make sure that they are the same.
• Issue 99

Results

• 4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1
  • Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1.xlsx
  • Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1_output.xlsx
  • Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1_output.mat
  • Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1_plots.zip
  • LSE: 3.5295e-08
  • Penalty term: 13.6109
  • Number of iterations: 12900
• 4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2
  • Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2.xlsx
  • Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2_output.xlsx
  • Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2_output.mat
  • Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2_plots.zip
  • LSE: 3.5295e-08
  • Penalty term: 13.6109
  • Number of iterations: 12900
• 4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1
  • Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1.xlsx
  • Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1_output.xlsx
  • Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1_output.mat
  • Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1_plots.zip
  • LSE: 0.1077
  • Penalty term: 63.1164
  • Number of iterations: 8700
• 4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2
  • Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2.xlsx
  • Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2_output.xlsx
  • Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2_output.mat
  • Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2_plots.zip
  • LSE: 0.1077
  • Penalty term: 63.1164
  • Number of iterations: 8700
• Analysis Workbook

Discussion

• The LSE, Penalty term, and the counter are the same between the two copies.
• The difference between the network_optimized_weights, optimized_production_rates, and optimized_threshold_b values of two copies of the Sigmoidal_estimation_fixb-0_fixP-0_graph was zero.
• The difference between the network_optimized_weights and optimized_production_rates values of two copies of the MM_estimation_fixP-0_graph was zero (no sheet for optimized_threshold_b).