Endy:PiP: Difference between revisions
From OpenWetWare
Jump to navigationJump to search
(38 intermediate revisions by 3 users not shown) | |||
Line 4: | Line 4: | ||
==== | ===Research Manuscripts=== | ||
===='''<font color="green">Barry #1</font>''': '' | |||
===='''<font color="green">Barry #1</font>''': ''Model-based forward engineering of autocatalytic, self-regulating, and orthogonal gene expression systems in Escherichia coli''==== | |||
*Authors: Barry, Drew | *Authors: Barry, Drew | ||
*Status: | *Status: Drew drafting for PNAS | ||
*Writing: | *Writing: On Google Docs | ||
*[[User:Barry Canton/Notebook/T7 RNAP transcription of rRNA | Project page]] & [[Endy:Chassis engineering/Paper|Paper page]]. | *[[User:Barry Canton/Notebook/T7 RNAP transcription of rRNA | Project page]] & [[Endy:Chassis engineering/Paper|Paper page]]. | ||
*<font color="red">Goal</font>: Submit | *<font color="red">Goal</font>: Submit June 2009 | ||
===='''<font color="green">Jason # | ===='''<font color="green">Jason #2</font>''': ''Programmed selection and preferential promotion of microbes using a selectostat''==== | ||
*Authors: JK & DE | *Authors: JK & DE | ||
*Status: | *Status: Endy drafting for PNAS | ||
* | *Main Text on Google Docs | ||
*Figures | |||
*Supplement | |||
* | |||
* | |||
*[[Endy:Notebook/Sortostat_Paper | OWW Page]] | *[[Endy:Notebook/Sortostat_Paper | OWW Page]] | ||
*<font color="red">Goal</font>: Submit | *<font color="red">Goal</font>: Submit June 2009 | ||
===='''<font color="green">Reshma #1</font>''': ''Using genetically encoded odorant reporters to engineer bacteria that smell like wintergreen and banana''==== | ===='''<font color="green">Reshma #1</font>''': ''Using genetically encoded odorant reporters to engineer bacteria that smell like wintergreen and banana''==== | ||
*Authors: RS & DE | *Authors: RS & DE | ||
*Status: reviews received, revision complete, sent to RC3 for his comments | *Status: reviews received, revision complete, sent to RC3 for his comments | ||
*<font color="red">Goal</font>: | *<font color="red">Goal</font>: submitted | ||
===='''<font color="green">Reshma #2</font>''': ''Signal levels, load, and error rates in engineered transcriptional devices''==== | ===='''<font color="green">Reshma #2</font>''': ''Signal levels, load, and error rates in engineered transcriptional devices''==== | ||
Line 54: | Line 51: | ||
===='''<font color="green">Ty #2</font>''': ''Scaffold number in yeast signaling system sets tradeoff between system output and dynamic range''==== | ===='''<font color="green">Ty #2</font>''': ''Scaffold number in yeast signaling system sets tradeoff between system output and dynamic range''==== | ||
*Authors: TT, DE | *Authors: TT, DE | ||
*Status: | *Status: Submitted to MSB | ||
*<font color="red">Goal</font>: | *<font color="red">Goal</font>: Get published ASAP. | ||
===='''<font color="green">Ty #3</font>''': ''Mechanics, Controls, and Modeling of Mating Pheromone-Initiated Signaling in the Yeast Saccharomyces cerevisiae: A Comprehensive Analysis''==== | ===='''<font color="green">Ty #3</font>''': ''Mechanics, Controls, and Modeling of Mating Pheromone-Initiated Signaling in the Yeast Saccharomyces cerevisiae: A Comprehensive Analysis''==== | ||
Line 79: | Line 76: | ||
===BOOKS=== | ===BOOKS=== | ||
===='''<font color="green">DE #1</font>''':CoTS==== | |||
*Authors: DE | |||
*Status: DE outlining | |||
*<font color="red">Goal</font>: Proposal by end of August | |||
===='''<font color="green">DE #2</font>''':I2SB==== | |||
*Authors: DE | |||
*Status: DE outlining | |||
*<font color="red">Goal</font>: Outline by end of August | |||
===BLANK=== | ===BLANK=== | ||
===='''<font color="green">Blank #1</font>''': ''Title,'' or equivalent==== | |||
*Authors: your names here | |||
*Status: your names here | |||
*<font color="red">Goal</font>: Submit by some date | |||
{{ShowGoogleExcel|id=pPNCEiE71Bq1I759bMAFhTg|width=800|height=600}} | |||
{{ShowGoogleWord|id=d7z7wrm_5cgnvmwcn|width=800|height=600}} |
Latest revision as of 14:04, 16 June 2009
This page is for keeping track of the status of papers in the Endy writing queue.
Research Manuscripts
Barry #1: Model-based forward engineering of autocatalytic, self-regulating, and orthogonal gene expression systems in Escherichia coli
- Authors: Barry, Drew
- Status: Drew drafting for PNAS
- Writing: On Google Docs
- Project page & Paper page.
- Goal: Submit June 2009
Jason #2: Programmed selection and preferential promotion of microbes using a selectostat
- Authors: JK & DE
- Status: Endy drafting for PNAS
- Main Text on Google Docs
- Figures
- Supplement
- OWW Page
- Goal: Submit June 2009
Reshma #1: Using genetically encoded odorant reporters to engineer bacteria that smell like wintergreen and banana
- Authors: RS & DE
- Status: reviews received, revision complete, sent to RC3 for his comments
- Goal: submitted
Reshma #2: Signal levels, load, and error rates in engineered transcriptional devices
- Authors: RS & DE
- Status: RS working on figures
- Goal: Submit by end of August
Samantha #1: Controlling cellular location by engineering phosphorylation
- Authors: SS & DE
- Status: In review at PLoS Biology
- Goal: Have in press in 2008
Samantha #2: Signals and specifications for a family of phosphorylation-dependent devices, or equivalent
- Authors: SS & DE
- Status: Outline and structure finalized, SS leading writing
- Goal: Submit by end of August
Ty #1: Tools for making systems biology models more scientific
- Authors: TT, DE
- Status: DE to do final edit, send to RB and TT for final approval
- Goal: Submit by end of August
Ty #2: Scaffold number in yeast signaling system sets tradeoff between system output and dynamic range
- Authors: TT, DE
- Status: Submitted to MSB
- Goal: Get published ASAP.
Ty #3: Mechanics, Controls, and Modeling of Mating Pheromone-Initiated Signaling in the Yeast Saccharomyces cerevisiae: A Comprehensive Analysis
- Authors: TT, DE
- Status: JT and TT to edit (not working well, what should DE do?)
- Goal: Submit by ???
Sri #1: Measures & models of phage T7 mRNA
- Authors: HK, DE, SK
- Status: Sri needs to provide Fig 4, Drew needs to edit
- Goal: Submit by end of August
Drew #1: A common signal carrier for genetic devices
- Authors: Austin, Drew, Tom, Randy, Samantha
- Status: DE to expand and rewrite
- Goal: Submit by end of August
Drew #2: Free as in phosphoramidites, or equivalent
- Authors: DG and DE
- Status: DE to write
- Goal: Submit by end of August
BOOKS
DE #1:CoTS
- Authors: DE
- Status: DE outlining
- Goal: Proposal by end of August
DE #2:I2SB
- Authors: DE
- Status: DE outlining
- Goal: Outline by end of August
BLANK
Blank #1: Title, or equivalent
- Authors: your names here
- Status: your names here
- Goal: Submit by some date
{{#widget:Google Spreadsheet |key=pPNCEiE71Bq1I759bMAFhTg |width=800 |height=600 }}
{{#widget:Google Documents |key=d7z7wrm_5cgnvmwcn |width=800 |height=600 }}