User:Mike Barnkob: Difference between revisions

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*Mike Barnkob
*Mike Barnkob
*Weatherall Institute for Molecular Medicine, University of Oxford
*Weatherall Institute for Molecular Medicine, University of Oxford
*Email: [[Special:Emailuser/Mike Barnkob|Say hallo]].
*Website: [http://www.mikebarnkob.dk www.mikebarnkob.dk].
*Website: [http://www.mikebarnkob.dk www.mikebarnkob.dk].


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Coloning
Coloning
* Gibson assembly
* CRISPR / Cas9
** Test
** Designing sgRNA oligos
*
** Cloning oligos into backbone
* CRISPR/Cas9 guide sequences
** Transforming bacteria with construct
** Screening for inserts
* Lentiviral work
** Lentiviral production
** Infecting target cells


Bacterial work
* Making LB agar plates
*


Immunology
Immunology
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Tissue culture work
Tissue culture work
* Medium
** R10
** D10
** DMEM for 293TLA cells
* Thawing cells
* Freezing down cells
* Split cells
* Count cells
* Harvest splenocytes
* Harvest BMDCs
* ''In vitro'' expansion of T cells
* Soft agar assay


Mouse work
Mouse work
* Bleeding
* Harvesting bone-marrow DC's
Visualization
* Long-time co-culture and visualization with live-dead marker


==Projects==
==Projects==
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'''Past:'''
'''Past:'''


[[Mike_Barnkob:Projects/Liquid handling robot|Liquid handling robot]]. An attempt to create a small liquid handling robot to do simple experiments with.
[[Mike_Barnkob:Projects/
 
[http://2009.igem.org/Team:SDU-Denmark Bacto Bandage]. 2009 SDU Denmark iGEM team. Our goal was to create an E. coli strain, which inhibits S. aureus biofilm formation in wounds by producing RNA III-inhibiting-peptide (RIP).

Revision as of 03:52, 18 December 2014

Information

  • Mike Barnkob
  • Weatherall Institute for Molecular Medicine, University of Oxford
  • Website: www.mikebarnkob.dk.

Protocols

Coloning

  • CRISPR / Cas9
    • Designing sgRNA oligos
    • Cloning oligos into backbone
    • Transforming bacteria with construct
    • Screening for inserts
  • Lentiviral work
    • Lentiviral production
    • Infecting target cells

Bacterial work

  • Making LB agar plates

Immunology

  • Flow cytometry
  • CFSE staining

Tissue culture work

  • Medium
    • R10
    • D10
    • DMEM for 293TLA cells
  • Thawing cells
  • Freezing down cells
  • Split cells
  • Count cells
  • Harvest splenocytes
  • Harvest BMDCs
  • In vitro expansion of T cells
  • Soft agar assay

Mouse work

  • Bleeding
  • Harvesting bone-marrow DC's

Visualization

  • Long-time co-culture and visualization with live-dead marker

Projects

I work on:

  • T cell and cancer cell interactions
  • Genetic manipulation of T cells

Past:

[[Mike_Barnkob:Projects/