List of UNSes: Difference between revisions
No edit summary |
No edit summary |
||
Line 4: | Line 4: | ||
U1: CATTACTCGCATCCATTCTCAGGCTGTCTCGTCTCGTCTC | U1: CATTACTCGCATCCATTCTCAGGCTGTCTCGTCTCGTCTC | ||
U2: GCTGGGAGTTCGTAGACGGAAACAAACGCAGAATCCAAGC | U2: GCTGGGAGTTCGTAGACGGAAACAAACGCAGAATCCAAGC | ||
U3: GCACTGAAGGTCCTCAATCGCACTGGAAACATCAAGGTCG | U3: GCACTGAAGGTCCTCAATCGCACTGGAAACATCAAGGTCG | ||
U4: CTGACCTCCTGCCAGCAATAGTAAGACAACACGCAAAGTC | U4: CTGACCTCCTGCCAGCAATAGTAAGACAACACGCAAAGTC | ||
U5: GAGCCAACTCCCTTTACAACCTCACTCAAGTCCGTTAGAG | U5: GAGCCAACTCCCTTTACAACCTCACTCAAGTCCGTTAGAG | ||
U6: CTCGTTCGCTGCCACCTAAGAATACTCTACGGTCACATAC | U6: CTCGTTCGCTGCCACCTAAGAATACTCTACGGTCACATAC | ||
U7: CAAGACGCTGGCTCTGACATTTCCGCTACTGAACTACTCG | U7: CAAGACGCTGGCTCTGACATTTCCGCTACTGAACTACTCG | ||
U8: CCTCGTCTCAACCAAAGCAATCAACCCATCAACCACCTGG | U8: CCTCGTCTCAACCAAAGCAATCAACCCATCAACCACCTGG | ||
U9: GTTCCTTATCATCTGGCGAATCGGACCCACAAGAGCACTG | U9: GTTCCTTATCATCTGGCGAATCGGACCCACAAGAGCACTG | ||
UX: CCAGGATACATAGATTACCACAACTCCGAGCCCTTCCACC | UX: CCAGGATACATAGATTACCACAACTCCGAGCCCTTCCACC |
Revision as of 11:31, 22 April 2014
List of Already-Designed UNSes
All current UNSes have been designed to minimize secondary structure under isothermal assembly conditions, to minimize cross-annealing to one another, and to minimize biological activity (no start codons, bacterial promoter-like sequences, or sequences with high BLAST scores to the E. coli genome). These UNSes were generated algorithmically as described previously.
U1: CATTACTCGCATCCATTCTCAGGCTGTCTCGTCTCGTCTC
U2: GCTGGGAGTTCGTAGACGGAAACAAACGCAGAATCCAAGC
U3: GCACTGAAGGTCCTCAATCGCACTGGAAACATCAAGGTCG
U4: CTGACCTCCTGCCAGCAATAGTAAGACAACACGCAAAGTC
U5: GAGCCAACTCCCTTTACAACCTCACTCAAGTCCGTTAGAG
U6: CTCGTTCGCTGCCACCTAAGAATACTCTACGGTCACATAC
U7: CAAGACGCTGGCTCTGACATTTCCGCTACTGAACTACTCG
U8: CCTCGTCTCAACCAAAGCAATCAACCCATCAACCACCTGG
U9: GTTCCTTATCATCTGGCGAATCGGACCCACAAGAGCACTG
UX: CCAGGATACATAGATTACCACAACTCCGAGCCCTTCCACC