List of UNSes: Difference between revisions

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U1: CATTACTCGCATCCATTCTCAGGCTGTCTCGTCTCGTCTC
'''U1:''' CATTACTCGCATCCATTCTCAGGCTGTCTCGTCTCGTCTC


U2: GCTGGGAGTTCGTAGACGGAAACAAACGCAGAATCCAAGC
'''U2:''' GCTGGGAGTTCGTAGACGGAAACAAACGCAGAATCCAAGC


U3: GCACTGAAGGTCCTCAATCGCACTGGAAACATCAAGGTCG  
'''U3:''' GCACTGAAGGTCCTCAATCGCACTGGAAACATCAAGGTCG  


U4: CTGACCTCCTGCCAGCAATAGTAAGACAACACGCAAAGTC
'''U4:''' CTGACCTCCTGCCAGCAATAGTAAGACAACACGCAAAGTC


U5: GAGCCAACTCCCTTTACAACCTCACTCAAGTCCGTTAGAG
'''U5:''' GAGCCAACTCCCTTTACAACCTCACTCAAGTCCGTTAGAG


U6: CTCGTTCGCTGCCACCTAAGAATACTCTACGGTCACATAC
'''U6:''' CTCGTTCGCTGCCACCTAAGAATACTCTACGGTCACATAC


U7: CAAGACGCTGGCTCTGACATTTCCGCTACTGAACTACTCG  
'''U7:''' CAAGACGCTGGCTCTGACATTTCCGCTACTGAACTACTCG  


U8: CCTCGTCTCAACCAAAGCAATCAACCCATCAACCACCTGG
'''U8:''' CCTCGTCTCAACCAAAGCAATCAACCCATCAACCACCTGG


U9: GTTCCTTATCATCTGGCGAATCGGACCCACAAGAGCACTG
'''U9:''' GTTCCTTATCATCTGGCGAATCGGACCCACAAGAGCACTG


UX: CCAGGATACATAGATTACCACAACTCCGAGCCCTTCCACC
'''UX:''' CCAGGATACATAGATTACCACAACTCCGAGCCCTTCCACC

Latest revision as of 11:32, 22 April 2014

List of Already-Designed UNSes

All current UNSes have been designed to minimize secondary structure under isothermal assembly conditions, to minimize cross-annealing to one another, and to minimize biological activity (no start codons, bacterial promoter-like sequences, or sequences with high BLAST scores to the E. coli genome). These UNSes were generated algorithmically as described previously.


U1: CATTACTCGCATCCATTCTCAGGCTGTCTCGTCTCGTCTC

U2: GCTGGGAGTTCGTAGACGGAAACAAACGCAGAATCCAAGC

U3: GCACTGAAGGTCCTCAATCGCACTGGAAACATCAAGGTCG

U4: CTGACCTCCTGCCAGCAATAGTAAGACAACACGCAAAGTC

U5: GAGCCAACTCCCTTTACAACCTCACTCAAGTCCGTTAGAG

U6: CTCGTTCGCTGCCACCTAAGAATACTCTACGGTCACATAC

U7: CAAGACGCTGGCTCTGACATTTCCGCTACTGAACTACTCG

U8: CCTCGTCTCAACCAAAGCAATCAACCCATCAACCACCTGG

U9: GTTCCTTATCATCTGGCGAATCGGACCCACAAGAGCACTG

UX: CCAGGATACATAGATTACCACAACTCCGAGCCCTTCCACC