Van Oudenaarden Lab:Y54F10AM.4
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>Y54F10AM.4b (ceh-44 spliced coding region)
atggaaatcgtctcaagagcatgggaatctgtagattgggaccgaattcaaacaagagtggaggctgaagtgacagcact tggacaacgacaagatgacagtgaaattcgtaaaacacgattggttgaggagagtaatgcatatagaggcagaactaata aggacagtcgaaaggtggcgatccctctgatcaaggcatttcaaagcgagtttgacggtcttctagcacggagcacagct gctgaaaatgcactgattgatatctgtaaatcgattgtcagcctgccagacccgaaaagtttgctgaaaggtgcagaagc ctggaagaacgacgctgaaaaaacacaaaaagcagttgaagaacgtgaagaattgaagcgtcaactgattaaagtgaata acgaattggaagatcttcgtggaaaggatgttaaagtacgaaaattgaaggataagcttgcgaagttggaatccgaacaa gacatttttatcgaaaacgccgtcaacgaagtcgaaaaaaaggcggaacaagagcttaacgatcgtctgacagagttaat cgctgaaaaagagaaaatgaaagaacaaaatgagattttggagaagaatatggatagtctcgagtcgaagaataaggata ttcaaagaaaactcgaaattgccaaacaaactgtcgagcagaaggatgggctcgagaatgagcaactttcgattgcaatg aaggatttggctgatgctaaacacaaaattgtatttctcgaggaacgtgtctcccaactggaaaatgaagccgaaaaagt gaatgaaagtaaaaaagcgggaaatatagaagatattgctgcacttggaagtgttcttgtacaaaaggatgacgtcattc aacagctcactaatgacattaaacgacatgaagcttcacacgtcgaagagctcgcaaaatggaaattggcagtttcggcg gtcgaaaagaagaataaaacgttgattggtgagctcaatgagctgaagaatcaattggagagccggaatgattatgaggc tattaagaatgaattgagacttcttcgcgaaatcgaattcggagattctgccgaagcgaacgccgaatcaattgaacgac tcggtgaaactgtggagacgctggatcgcctgctcgccgagaaaaatcgccgtcttcagaatgaaaatgctagtcttcga gttgcaaatgatggatttaaaggacgaaatgaggagcaagaagccgaattgacagtgctcaaagagaaatccgagagaaa tgatcgactgattgctcaacttgaagccgatttggccagtgctgtgcaggatattgggatccccgaacgaatgggtacca acgaaatgctgaaagatgctccagcacctacaatctctgatgcttcacttgttccaatccttacatcacaacgaaataga ctccacgaaagagtgacgtcactggaagaagccatttcactggaaaagacgaaacaactttcagtgcagaatgagattga aagagttcgagaggagaatattcgattgtgtgagcggattcgatttctgcagtctcctggtggtcagcagcaggcaaatg ttgaagccgggctggggaatgaaaacggaaatcgaaacaagaaggtctcacttcatgacaaaactactctaaatatgggt cgcgcgattcttgcgactccaaaaagtcgtactgtattcttctcgtatctcctgattcttcatgctctcatcatgcttgt tctctacaaattcgcatttgatcaatcggttgttcgagatgctgaaaccgaatgtgaatataaattccatcaacatatgc tggacaatcataagcaataa
Name of probe set: ceh-44
Probes designed on Mon, 01 Mar 10 13:47:56 -0700
48 probes designed for target of length 1860
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
gctcttgagacgatttccat, ceh-44_1, 1, 1, 45
tcggtcccaatctacagatt, ceh-44_2, 2, 26, 45
ttcagcctccactcttgttt, ceh-44_3, 3, 50, 45
atcttgtcgttgtccaagtg, ceh-44_4, 4, 77, 45
ctcctcaaccaatcgtgttt, ceh-44_5, 5, 113, 45
gtccttattagttctgcctc, ceh-44_6, 6, 146, 45
aatgccttgatcagagggat, ceh-44_7, 7, 181, 45
aagaccgtcaaactcgcttt, ceh-44_8, 8, 203, 45
agtgcattttcagcagctgt, ceh-44_9, 9, 235, 45
ggctgacaatcgatttacag, ceh-44_10, 10, 264, 45
tcagcaaacttttcgggtct, ceh-44_11, 11, 288, 45
ttttcagcgtcgttcttcca, ceh-44_12, 12, 322, 45
cttcacgttcttcaactgct, ceh-44_13, 13, 351, 45
cacgaagatcttccaattcg, ceh-44_14, 14, 402, 45
cttcgcaagcttatccttca, ceh-44_15, 15, 446, 45
gttgacggcgttttcgataa, ceh-44_16, 16, 488, 45
gttccgcctttttttcgact, ceh-44_17, 17, 510, 45
tgtcagacgatcgttaagct, ceh-44_18, 18, 533, 45
cgactcgagactatccatat, ceh-44_19, 19, 608, 45
ctcgacagtttgtttggcaa, ceh-44_20, 20, 659, 45
aaagttgctcattctcgagc, ceh-44_21, 21, 690, 45
cagccaaatccttcattgca, ceh-44_22, 22, 714, 45
cacgttcctcgagaaataca, ceh-44_23, 23, 750, 45
gcttcattttccagttggga, ceh-44_24, 24, 772, 45
ccaagtgcagcaatatcttc, ceh-44_25, 25, 829, 45
ctgttgaatgacgtcatcct, ceh-44_26, 26, 866, 45
gtgtgaagcttcatgtcgtt, ceh-44_27, 27, 902, 45
ttccattttgcgagctcttc, ceh-44_28, 28, 925, 45
tattcttcttttcgaccgcc, ceh-44_29, 29, 957, 45
ttgagctcaccaatcaacgt, ceh-44_30, 30, 979, 45
ggctctccaattgattcttc, ceh-44_31, 31, 1005, 45
cgcgaagaagtctcaattca, ceh-44_32, 32, 1050, 45
gcagaatctccgaattcgat, ceh-44_33, 33, 1072, 45
aattgattcggcgttcgctt, ceh-44_34, 34, 1094, 45
tgaagacggcgatttttctc, ceh-44_35, 35, 1159, 45
gcaactcgaagactagcatt, ceh-44_36, 36, 1186, 45
gctcctcatttcgtccttta, ceh-44_37, 37, 1218, 45
tttgagcactgtcaattcgg, ceh-44_38, 38, 1244, 45
gtcgatcatttctctcggat, ceh-44_39, 39, 1269, 45
tcggcttcaagttgagcaat, ceh-44_40, 40, 1291, 45
ttcgttggtacccattcgtt, ceh-44_41, 41, 1346, 45
atcagagattgtaggtgctg, ceh-44_42, 42, 1382, 45
cgttgtgatgtaaggattgg, ceh-44_43, 43, 1414, 45
cactctttcgtggagtctat, ceh-44_44, 44, 1436, 45
aaatggcttcttccagtgac, ceh-44_45, 45, 1458, 45
gcactgaaagttgtttcgtc, ceh-44_46, 46, 1488, 45
cctctcgaactctttcaatc, ceh-44_47, 47, 1515, 45
ccgctcacacaatcgaatat, ceh-44_48, 48, 1538, 45
