Van Oudenaarden Lab:T26C11.7
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>T26C11.7 (ceh-39 spliced coding region)
atggacttctccaacacataccgaaattacggagaggtcgtcgacttcccagaggacttcctcagtgactacgttccaac tgtgaaaagcgagccagagccagctgcaattgcaccgtccgtttgcgagcctccaatttcaacgacacgaaactatggaa cggactttggcagagcttcttcgatgtgcggatcgtcttcttcttcgtcctcttcgtcgtactcatcgggatcgtcgccg aactatttgaccgaaaacggaggagatacagaagagccgaggttcgaggaattggtgtctaggaaaatgagtttcgacag tgaaaatgttgctcaggtgagcaaccaaatggattatgcaagagatacttatgcagattcacgtattccatttgcttcaa ttgactccaacgatgctctgcttccatatccagtgaacaattatgtggctgcactaccagttccagttccagcaaagaaa tccagaggcagaactgcaccaagaactccgaagtctctagaaacttcgaaaccaggccgcggggtcaagcgcccggcttc caaagaaattgatgctaaagaccttggaatcggagatctctcggctcacatgaacaggcagattggcgatgatgaagagc tcgacactcaactcatcgctcatcgtattctggacgagctcaaagagcaatgcatcccacaagcttcacttgccgttaaa gttctaggcagaagccaaggaacactgtcggatctgctccgcaagccgaaaccatggggcattatgaagaatggtcgagg aacgttccagcgtatggccaactggcttgacttggatccggtagttcgtcgtgcattgtgctttatgaaaaaggaagatg ttgcgaggatcactgggatggctgagccaactccagcaaaaagagcacgccaaacaacgcctagcgacgaacgaatccga cgcttcacattcacgcaaacccagctcgactcgttgcatacagtcttccaacaacaagatcgtccgaatcgcgaaatgca acaggctctgagtgcgacattgaagctcaaccgttccaccgtcggcaatttctttatgaacgcccgccgtcgtcttccaa aagctgcaccggtcagtcaaaaccttgtcgccgaacacgccattgatcacaatcaaccgggacccagccaccattattaa
Name of probe set: ceh-39
Probes designed on Mon, 01 Mar 10 13:11:13 -0700
48 probes designed for target of length 1200
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
gtatgtgttggagaagtcca, ceh-39_1, 1, 2, 45
cgacgacctctccgtaattt, ceh-39_2, 2, 24, 50
agtcactgaggaagtcctct, ceh-39_3, 3, 51, 50
tcgcttttcacagttggaac, ceh-39_4, 4, 73, 45
tgcaattgcagctggctctg, ceh-39_5, 5, 95, 55
aaattggaggctcgcaaacg, ceh-39_6, 6, 120, 50
gttccatagtttcgtgtcgt, ceh-39_7, 7, 142, 45
cgaagaagctctgccaaagt, ceh-39_8, 8, 164, 50
aagaagaagacgatccgcac, ceh-39_9, 9, 186, 50
gatgagtacgacgaagagga, ceh-39_10, 10, 208, 50
tcaaatagttcggcgacgat, ceh-39_11, 11, 231, 45
tctgtatctcctccgttttc, ceh-39_12, 12, 253, 45
acaccaattcctcgaacctc, ceh-39_13, 13, 279, 50
ctgtcgaaactcattttcct, ceh-39_14, 14, 301, 40
gctcacctgagcaacatttt, ceh-39_15, 15, 323, 45
ctcttgcataatccatttgg, ceh-39_16, 16, 345, 40
ggaatacgtgaatctgcata, ceh-39_17, 17, 370, 40
cgttggagtcaattgaagca, ceh-39_18, 18, 393, 45
tcactggatatggaagcaga, ceh-39_19, 19, 417, 45
ggtagtgcagccacataatt, ceh-39_20, 20, 439, 45
gatttctttgctggaactgg, ceh-39_21, 21, 463, 45
ttcttggtgcagttctgcct, ceh-39_22, 22, 486, 50
gaagtttctagagacttcgg, ceh-39_23, 23, 508, 45
tcaatttctttggaagccgg, ceh-39_24, 24, 553, 45
tccgattccaaggtctttag, ceh-39_25, 25, 575, 45
tgttcatgtgagccgagaga, ceh-39_26, 26, 597, 50
tcttcatcatcgccaatctg, ceh-39_27, 27, 619, 45
atgagcgatgagttgagtgt, ceh-39_28, 28, 644, 45
ctttgagctcgtccagaata, ceh-39_29, 29, 666, 45
tgaagcttgtgggatgcatt, ceh-39_30, 30, 689, 45
tgcctagaactttaacggca, ceh-39_31, 31, 711, 45
agatccgacagtgttccttg, ceh-39_32, 32, 736, 50
tcataatgccccatggtttc, ceh-39_33, 33, 768, 45
tggaacgttcctcgaccatt, ceh-39_34, 34, 790, 50
agtcaagccagttggccata, ceh-39_35, 35, 813, 50
aaagcacaatgcacgacgaa, ceh-39_36, 36, 845, 45
cctcgcaacatcttcctttt, ceh-39_37, 37, 869, 45
tttttgctggagttggctca, ceh-39_38, 38, 903, 45
ttcgtcgctaggcgttgttt, ceh-39_39, 39, 932, 50
tgaatgtgaagcgtcggatt, ceh-39_40, 40, 954, 45
aagactgtatgcaacgagtc, ceh-39_41, 41, 988, 45
gattcggacgatcttgttgt, ceh-39_42, 42, 1011, 45
actcagagcctgttgcattt, ceh-39_43, 43, 1034, 45
aacggttgagcttcaatgtc, ceh-39_44, 44, 1056, 45
cataaagaaattgccgacgg, ceh-39_45, 45, 1079, 45
tgcagcttttggaagacgac, ceh-39_46, 46, 1109, 50
cgacaaggttttgactgacc, ceh-39_47, 47, 1131, 50
ttgtgatcaatggcgtgttc, ceh-39_48, 48, 1153, 45
