Van Oudenaarden Lab:T26C11.5
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>T26C11.5 (ceh-41 spliced coding region + 3'-UTR)
atgtcccagcattttgtttcaggaccaacctcttgcgatcctgaaaaaaaagttgacttgccatttggctcgcagaaaac aatgagtggcatcattcttcgggccgacgtctcacaggcccataacattgcactgcttatatatggcccggactatctgc ctcaaatggctcttaaaggcgtggaggatcctcatggaaacgtggctccgtcagtgatctcagagccatcagctattgct ccagaagtttcagcaactgatagtcttcaaaaagacacaaaaagcgatgaagcttgtattggcaacatgactacaaattc cgtagaaaaatcagaagaagaaggggaaaaaagcgatgctcagccgtcaaaccaaggaaacccttccagacaaaagcaac ctccaactggcaagagaaagcgggatgatctgcccgcccgcgaacactcggaaacattttcaaatgtagaaggatcatcg gaacgttctacgacaagatcacaaagccgagtcagtcttgacgaggaccgtcagaattcggctccggtccgtcgttcagt tgaagcacacattcttgtgcagaatgcgactccaactgtggttggcggcaacggctcttcgagttcaccacccaagaaga caaagagcccattcaccgagcatgaaattgcagtgatgatggctctttttgaaatcaacaagtctccaaatcatgaagaa gttcaaaaattggctgttcaactgaacctgggctacagaagcgtggctaattttttcatgaacaaacgggccaaggagcg gaaaaaattgcaagggcatggacccgggccctcttaa
t ttgttatttcttttatttttaatatgatttcaatttattcttcaatttattgccaattactgttttttctgaacttgttt tgccaatcctgataattttcttcatttccgaattcccttttccaaagtacatttctgaataatgccataatttttttcct gttctcaatttttacccaagcaatttctttgaagaggaattgatcttatcgagattggtacctgaccattatcaccgatt agaaagtagctcaaattcatagatcattttttccaaagtttcgtcatgaagatttccacaatttttcctaggtcatagct ctttgaaaagtttcactcttcctagctttgaactgtatggaacgtagaattgattattctttattcatctccggtgacct atgtttttcttattctctggttttcgtactttgtttccatattttttcgataccaggttgggttttaggtgaatcttctc agttttctcaactttggattgttgcgtttttgagattttttaaaattaataaaaagttttgctgctc
Name of probe set: ceh-41
Probes designed on Mon, 01 Mar 10 13:39:18 -0700
48 probes designed for target of length 1385
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
ctgaaacaaaatgctgggac, ceh-41_1, 1, 3, 45
tttcaggatcgcaagaggtt, ceh-41_2, 2, 27, 45
gccaaatggcaagtcaactt, ceh-41_3, 3, 50, 45
tgccactcattgttttctgc, ceh-41_4, 4, 72, 45
aatgttatgggcctgtgaga, ceh-41_5, 5, 110, 45
tagtccgggccatatataag, ceh-41_6, 6, 136, 45
ctttaagagccatttgaggc, ceh-41_7, 7, 159, 45
tttccatgaggatcctccac, ceh-41_8, 8, 181, 50
atagctgatggctctgagat, ceh-41_9, 9, 217, 45
agttgctgaaacttctggag, ceh-41_10, 10, 239, 45
gcttcatcgctttttgtgtc, ceh-41_11, 11, 274, 45
tgtagtcatgttgccaatac, ceh-41_12, 12, 296, 40
cttctgatttttctacggaa, ceh-41_13, 13, 318, 35
agcatcgcttttttcccctt, ceh-41_14, 14, 341, 45
aagggtttccttggtttgac, ceh-41_15, 15, 366, 45
gttggaggttgcttttgtct, ceh-41_16, 16, 388, 45
agatcatcccgctttctctt, ceh-41_17, 17, 412, 45
aaatgtttccgagtgttcgc, ceh-41_18, 18, 440, 45
gttccgatgatccttctaca, ceh-41_19, 19, 465, 45
gctttgtgatcttgtcgtag, ceh-41_20, 20, 488, 45
attctgacggtcctcgtcaa, ceh-41_21, 21, 518, 50
tgcttcaactgaacgacgga, ceh-41_22, 22, 548, 50
tcgcattctgcacaagaatg, ceh-41_23, 23, 570, 45
ttgtcttcttgggtggtgaa, ceh-41_24, 24, 624, 45
tttcatgctcggtgaatggg, ceh-41_25, 25, 648, 50
aaaagagccatcatcactgc, ceh-41_26, 26, 670, 45
catgatttggagacttgttg, ceh-41_27, 27, 696, 40
ggttcagttgaacagccaat, ceh-41_28, 28, 729, 45
aattagccacgcttctgtag, ceh-41_29, 29, 753, 45
ttggcccgtttgttcatgaa, ceh-41_30, 30, 775, 45
cccttgcaattttttccgct, ceh-41_31, 31, 797, 45
taacaaattaagagggcccg, ceh-41_32, 32, 825, 45
cagaaaaaacagtaattggc, ceh-41_33, 33, 890, 35
atcaggattggcaaaacaag, ceh-41_34, 34, 912, 40
ctttggaaaagggaattcgg, ceh-41_35, 35, 946, 45
gggtaaaaattgagaacagg, ceh-41_36, 36, 996, 40
ttcctcttcaaagaaattgc, ceh-41_37, 37, 1018, 35
caggtaccaatctcgataag, ceh-41_38, 38, 1043, 45
gagctactttctaatcggtg, ceh-41_39, 39, 1071, 45
cttcatgacgaaactttgga, ceh-41_40, 40, 1110, 40
caaagagctatgacctagga, ceh-41_41, 41, 1144, 45
agctaggaagagtgaaactt, ceh-41_42, 42, 1166, 40
ttctacgttccatacagttc, ceh-41_43, 43, 1188, 40
gtcaccggagatgaataaag, ceh-41_44, 44, 1217, 45
caaagtacgaaaaccagaga, ceh-41_45, 45, 1252, 40
cccaacctggtatcgaaaaa, ceh-41_46, 46, 1281, 45
gaaaactgagaagattcacc, ceh-41_47, 47, 1306, 40
ctcaaaaacgcaacaatcca, ceh-41_48, 48, 1333, 40
