Van Oudenaarden Lab:F55B12.1
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>F55B12.1 (ceh-24 spliced coding region)
atgagcgagaaagagacgccgtctcctgttctggatgttaaaaaagaaaagaatgaagagactggaattgatgaggagaa gagctcggaagatgattgctccaaaagatcgaaggttaaatccaatccctccaagttttcagtcaacagcattttatcac cattggagagtttagttcgtgtacaacaacagcttctcaaaatggctgcatcaaaatctggaacacctggaacaaatgca ggagttcctggtgcgtttccgtatggtccaggtagacttccaggcaattattttgcaggaccatttcctggttacagcgg agctcaaccaaattggtacaatgggaatgatccaagatttgcagcagctgcagctttacttccgtgctctattgatccag ttagatctgctataaatcatcaattttcaatgagttcaatgagtcaacgacggaaaagaagagtcctattcagtcaggca caagtttacgaattggaacgaagattcaaacaagcgaaatatttaactgctccggaaagggagcaactggctaattcgat tcggttgactccaacgcaggtgaagatctggtttcaaaaccaccgatacaagtgcaagcgtcaggagaaagaaaaagcaa tgagtggtcttggacacagtgaagatggaagctcacccccaccagataacgatgatgatgacgacaaatactctattgaa atggatgataaagatgacgaggaggaagaagaatcagaaaaaccagtgttaaagccaagtggagtatttgggctccccta ccctccaaatgctgctgcagctgccgccgctgcagcggctgcgttcaattttccttttgctgcacaaggaccgaatcccg cctattatatgcgttggtga
Name of probe set: ceh-24
Probes designed on Mon, 01 Mar 10 12:36:10 -0700
40 probes designed for target of length 900 (target too short for 48 probes)
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
ggcgtctctttctcgctcat, ceh-24_1, 1, 1, 55
tttaacatccagaacaggag, ceh-24_2, 2, 23, 40
ccagtctcttcattcttttc, ceh-24_3, 3, 46, 40
cgagctcttctcctcatcaa, ceh-24_4, 4, 68, 50
gatcttttggagcaatcatc, ceh-24_5, 5, 91, 40
ggagggattggatttaacct, ceh-24_6, 6, 113, 45
aaatgctgttgactgaaaac, ceh-24_7, 7, 135, 35
actaaactctccaatggtga, ceh-24_8, 8, 157, 40
gagaagctgttgttgtacac, ceh-24_9, 9, 179, 45
cagattttgatgcagccatt, ceh-24_10, 10, 201, 40
cctgcatttgttccaggtgt, ceh-24_11, 11, 223, 50
atacggaaacgcaccaggaa, ceh-24_12, 12, 245, 50
attgcctggaagtctacctg, ceh-24_13, 13, 269, 50
caggaaatggtcctgcaaaa, ceh-24_14, 14, 291, 45
tttggttgagctccgctgta, ceh-24_15, 15, 313, 50
tggatcattcccattgtacc, ceh-24_16, 16, 335, 45
aagctgcagctgctgcaaat, ceh-24_17, 17, 357, 50
tggatcaatagagcacggaa, ceh-24_18, 18, 380, 45
gatgatttatagcagatcta, ceh-24_19, 19, 402, 30
cgttgactcattgaactcat, ceh-24_20, 20, 430, 40
gaataggactcttcttttcc, ceh-24_21, 21, 452, 40
ccaattcgtaaacttgtgcc, ceh-24_22, 22, 477, 45
ttcgcttgtttgaatcttcg, ceh-24_23, 23, 499, 40
cctttccggagcagttaaat, ceh-24_24, 24, 521, 45
gaatcgaattagccagttgc, ceh-24_25, 25, 543, 45
ttcacctgcgttggagtcaa, ceh-24_26, 26, 565, 50
tcggtggttttgaaaccaga, ceh-24_27, 27, 587, 45
tctcctgacgcttgcacttg, ceh-24_28, 28, 609, 55
agaccactcattgctttttc, ceh-24_29, 29, 631, 40
gcttccatcttcactgtgtc, ceh-24_30, 30, 653, 50
catcgttatctggtgggggt, ceh-24_31, 31, 675, 55
atagagtatttgtcgtcatc, ceh-24_32, 32, 697, 35
gtcatctttatcatccattt, ceh-24_33, 33, 719, 30
tttctgattcttcttcctcc, ceh-24_34, 34, 741, 40
ccacttggctttaacactgg, ceh-24_35, 35, 763, 50
agggtaggggagcccaaata, ceh-24_36, 36, 785, 55
cggcagctgcagcagcattt, ceh-24_37, 37, 807, 60
aaaattgaacgcagccgctg, ceh-24_38, 38, 833, 50
tcggtccttgtgcagcaaaa, ceh-24_39, 39, 855, 50
caacgcatataataggcggg, ceh-24_40, 40, 877, 50
