Van Oudenaarden Lab:F16H11.4
Progress:
Probes designed: (02-28-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>F16H11.4 (ceh-1 spliced coding region + UTRs)
ctatgaatggctttcgtgtcgaagatttgctatccgaacgggaaaaagactccaactcggatgaagccacgcatcaaaag tctccagctgatggcgggaaatcgagtcggaaactcaaa
atgcggcgagccagaactgcattcacttatgagcaattggttgcgctggaaaacaaattcaagacttcacgttatttgag cgtcgtagagcgtttaaatttggcaattcaacttcagctttctgaaactcaggtaaaaatctggttccaaaaccggcgta ccaagtggaagaaacacaatccgggacaagatgcaaatacgcctcaaaccccaccatcttccgatgaaactcagattcaa ccaattctaccggcaaatcctataacttcatttagttcattgcttttgccgccaataatatctccagcaaactcagcagt tctacaaggaacatccatcccattaacactgttcaacttgaaccaaattctaatgcctcaaaatgtgggcttcaattaa
atggatattttgtttttgttttttttttcggtgtttttttttctcttcttacaa tttgtacgggttctgagcttaaactctgaccgtttaatctattccatttctatcacatgagcttgaaacttggcttaact tatagcccccacacctagtttttaaaacaaccattttagtgtgtagactccggtttctatatctttgaatccacatatct ttctcatttcctgcaatcccatttacccaatacttcaatttcattcaatccggttttattatcgcttgatcgatatgaaa tgtcttaaatacaataaaattggcccatggatcaatgaagtaatgatgattga
Name of probe set: ceh-1
Probes designed on Sun, 28 Feb 10 18:16:11 -0700
39 probes designed for target of length 865 (target too short for 48 probes)
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
gacacgaaagccattcatag, ceh-1_1, 1, 1, 45
cccgttcggatagcaaatct, ceh-1_2, 2, 23, 50
tcatccgagttggagtcttt, ceh-1_3, 3, 45, 45
tggagacttttgatgcgtgg, ceh-1_4, 4, 67, 50
gactcgatttcccgccatca, ceh-1_5, 5, 89, 55
gctcgccgcattttgagttt, ceh-1_6, 6, 111, 50
ctcataagtgaatgcagttc, ceh-1_7, 7, 133, 40
tgttttccagcgcaaccaat, ceh-1_8, 8, 155, 45
aaataacgtgaagtcttgaa, ceh-1_9, 9, 177, 30
atttaaacgctctacgacgc, ceh-1_10, 10, 199, 45
aaagctgaagttgaattgcc, ceh-1_11, 11, 221, 40
cagatttttacctgagtttc, ceh-1_12, 12, 243, 35
cttggtacgccggttttgga, ceh-1_13, 13, 265, 55
gtcccggattgtgtttcttc, ceh-1_14, 14, 287, 50
gtttgaggcgtatttgcatc, ceh-1_15, 15, 309, 45
agtttcatcggaagatggtg, ceh-1_16, 16, 331, 45
ccggtagaattggttgaatc, ceh-1_17, 17, 353, 45
ctaaatgaagttataggatt, ceh-1_18, 18, 375, 25
tattggcggcaaaagcaatg, ceh-1_19, 19, 397, 45
ctgctgagtttgctggagat, ceh-1_20, 20, 419, 50
gggatggatgttccttgtag, ceh-1_21, 21, 441, 50
gttcaagttgaacagtgtta, ceh-1_22, 22, 463, 35
cattttgaggcattagaatt, ceh-1_23, 23, 485, 30
atatccatttaattgaagcc, ceh-1_24, 24, 507, 30
cgaaaaaaaaaacaaaaaca, ceh-1_25, 25, 529, 20
gtaagaagagaaaaaaaaac, ceh-1_26, 26, 551, 25
aagctcagaacccgtacaaa, ceh-1_27, 27, 573, 45
atagattaaacggtcagagt, ceh-1_28, 28, 595, 35
aagctcatgtgatagaaatg, ceh-1_29, 29, 617, 35
gctataagttaagccaagtt, ceh-1_30, 30, 639, 35
gttttaaaaactaggtgtgg, ceh-1_31, 31, 661, 35
gagtctacacactaaaatgg, ceh-1_32, 32, 683, 40
ggattcaaagatatagaaac, ceh-1_33, 33, 705, 30
gcaggaaatgagaaagatat, ceh-1_34, 34, 727, 35
gaagtattgggtaaatggga, ceh-1_35, 35, 749, 40
taaaaccggattgaatgaaa, ceh-1_36, 36, 771, 30
catttcatatcgatcaagcg, ceh-1_37, 37, 795, 40
gggccaattttattgtattt, ceh-1_38, 38, 819, 30
catcattacttcattgatcc, ceh-1_39, 39, 841, 35
