Van Oudenaarden Lab:C33D12.7
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>C33D12.7 (ceh-30 spliced coding region)
cttgtcttatagtcacccctcatcgtccgacaataaccaatcatcggtgccttcaacagtgtcgcattcccgactttcga acgtgcaaagcattcgtttaacacttttctacagtaccactcacttcccaaa
atgtcacttctcgaccctcggcagtttctgcttcccgctttttatctggatccgactacacaagcacttctagctcaagc agcttcaacttccccgtgcaacaaaatttcgtcttcttcttcattccgcatttctgacattctcgagcaatccccaaaca attcatcccattcaaacgatcacgacccatcgccacaatcaattaaatctgatttttcaacttcgccaagagcaagcagc cccggcggcgatcgaatgggtagtccaggcagttgcaaaaaatctcggaaggcaagaaccatcttcactgacaagcagtt gcaagagttggagaatacatttgaaaagcaaaagtatctatcagtccaggacaggatggatttggcgcacagaatgggtc tcactgatactcaagtcaagacgtggtaccaaaatagaagaacaaaatggaagcgacaggcaacaagtggaatggatctt ctatcggaacctggaaacctctccgcagttcagaacttgatcagaagcagtccatattgggccaactatatcacagcctt acctatgggcactcagctaccgatgatgggcctacccatgtctatgattgttcccccagcccatgctttccagccttcct cctcttcaaattctccatccactcacatatccagtgaatcccctcagttggatgtttccagcaactcagaatag
tatttcttgtgttaatttttaaaatttgtatgtaatattttcaattaaagtc acaaaaaccgatctcaatgggttagatagggagaagacgctttctttttttcacaacattgcatatgtatcgcttgtgtt atttttattttgcttgattatgtcatttccacgtcattaataataatattattatttt
Name of probe set: ceh-30
Probes designed on Mon, 01 Mar 10 12:44:47 -0700
47 probes designed for target of length 1036 (target too short for 48 probes)
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
aggggtgactataagacaag, ceh-30_1, 1, 1, 45
gattggttattgtcggacga, ceh-30_2, 2, 23, 45
cgacactgttgaaggcaccg, ceh-30_3, 3, 45, 60
gcacgttcgaaagtcgggaa, ceh-30_4, 4, 67, 55
aaaagtgttaaacgaatgct, ceh-30_5, 5, 89, 30
tgggaagtgagtggtactgt, ceh-30_6, 6, 111, 50
cgagggtcgagaagtgacat, ceh-30_7, 7, 133, 55
aaaagcgggaagcagaaact, ceh-30_8, 8, 155, 45
cttgtgtagtcggatccaga, ceh-30_9, 9, 177, 50
gaagctgcttgagctagaag, ceh-30_10, 10, 199, 50
aattttgttgcacggggaag, ceh-30_11, 11, 221, 45
tgcggaatgaagaagaagac, ceh-30_12, 12, 243, 45
gattgctcgagaatgtcaga, ceh-30_13, 13, 265, 45
tgaatgggatgaattgtttg, ceh-30_14, 14, 287, 35
gtggcgatgggtcgtgatcg, ceh-30_15, 15, 309, 65
gaaaaatcagatttaattga, ceh-30_16, 16, 331, 20
gctgcttgctcttggcgaag, ceh-30_17, 17, 353, 60
tacccattcgatcgccgccg, ceh-30_18, 18, 375, 65
gattttttgcaactgcctgg, ceh-30_19, 19, 397, 45
gaagatggttcttgccttcc, ceh-30_20, 20, 419, 50
actcttgcaactgcttgtca, ceh-30_21, 21, 441, 45
tgcttttcaaatgtattctc, ceh-30_22, 22, 463, 30
gtcctggactgatagatact, ceh-30_23, 23, 485, 45
ttctgtgcgccaaatccatc, ceh-30_24, 24, 507, 50
acttgagtatcagtgagacc, ceh-30_25, 25, 529, 45
tctattttggtaccacgtct, ceh-30_26, 26, 551, 40
cctgtcgcttccattttgtt, ceh-30_27, 27, 573, 45
agaagatccattccacttgt, ceh-30_28, 28, 595, 40
ggagaggtttccaggttccg, ceh-30_29, 29, 617, 60
ttctgatcaagttctgaact, ceh-30_30, 30, 639, 35
tagttggcccaatatggact, ceh-30_31, 31, 661, 45
gcccataggtaaggctgtga, ceh-30_32, 32, 683, 55
ggcccatcatcggtagctga, ceh-30_33, 33, 705, 60
ggaacaatcatagacatggg, ceh-30_34, 34, 727, 45
aggctggaaagcatgggctg, ceh-30_35, 35, 749, 60
atggagaatttgaagaggag, ceh-30_36, 36, 771, 40
gattcactggatatgtgagt, ceh-30_37, 37, 793, 40
gctggaaacatccaactgag, ceh-30_38, 38, 815, 50
acaagaaatactattctgag, ceh-30_39, 39, 837, 30
catacaaattttaaaaatta, ceh-30_40, 40, 859, 10
gtgactttaattgaaaatat, ceh-30_41, 41, 881, 20
taacccattgagatcggttt, ceh-30_42, 42, 903, 40
aagaaagcgtcttctcccta, ceh-30_43, 43, 925, 45
acatatgcaatgttgtgaaa, ceh-30_44, 44, 947, 30
aaataaaaataacacaagcg, ceh-30_45, 45, 969, 25
gtggaaatgacataatcaag, ceh-30_46, 46, 991, 35
taataatattattattaatg, ceh-30_47, 47, 1013, 5
