User talk:Darek Kedra/sandbox 27

Fastq compression

• dsrc (new, from 2011)

http://sun.aei.polsl.pl/dsrc/

• Genomic Squeeze (G-SQueeZ)

http://www.tgen.org/research/gsqueez.cfm

• bsc

http://libbsc.com/default.aspx

• see the Bonfield page with comparisons:

http://seqanswers.com/forums/archive/index.php/t-6349.html

NGS reads simulation

• https://sourceforge.net/projects/gemsim/
• Flux Simulator

new assemblers

ftp://ftp.genome.umd.edu/pub/MSR-CA/ water buffalo