User:Patrick Killion

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Contact Info

Patrick Killion (an artistic interpretation)
  • Patrick Killion
  • Assistant Professor of Biology
  • Delaware Valley College

Education

  • 2007, PhD Cell & Molecular Biology, University of Texas at Austin
  • 1997, BS Computer Science, Texas A&M University

Research interests

  1. Bioinformatics
  2. Computational Biology
  3. RNA-seq, ChIP-seq
  4. Regulatory Networks
  5. MicroRNAs

Publications

  1. Polioudakis D, Bhinge AA, Killion PJ, Lee BK, Abell NS, and Iyer VR. A Myc-microRNA network promotes exit from quiescence by suppressing the interferon response and cell-cycle arrest genes. Nucleic Acids Res. 2013 Feb 1;41(4):2239-54. DOI:10.1093/nar/gks1452 | PubMed ID:23303785 | HubMed [Paper1]
  2. Killion PJ and Iyer VR. ArrayPlex: distributed, interactive and programmatic access to genome sequence, annotation, ontology, and analytical toolsets. Genome Biol. 2008;9(11):R159. DOI:10.1186/gb-2008-9-11-r159 | PubMed ID:19014503 | HubMed [Paper2]
  3. Killion PJ and Iyer VR. Microarray data visualization and analysis with the Longhorn Array Database (LAD). Curr Protoc Bioinformatics. 2004 Dec;Chapter 7:Unit 7.10. DOI:10.1002/0471250953.bi0710s08 | PubMed ID:18428730 | HubMed [Paper3]
  4. Hu Z, Killion PJ, and Iyer VR. Genetic reconstruction of a functional transcriptional regulatory network. Nat Genet. 2007 May;39(5):683-7. DOI:10.1038/ng2012 | PubMed ID:17417638 | HubMed [Paper4]
  5. Killion PJ, Sherlock G, and Iyer VR. The Longhorn Array Database (LAD): an open-source, MIAME compliant implementation of the Stanford Microarray Database (SMD). BMC Bioinformatics. 2003 Aug 20;4:32. DOI:10.1186/1471-2105-4-32 | PubMed ID:12930545 | HubMed [Paper5]
All Medline abstracts: PubMed | HubMed

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