User:Matthew Whiteside/Notebook/Fumigatus Microarray/Tasks/Task2

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TASK2: Membrane / Secreted Proteins

Notes

Could potentially use [TransportDB ]. Transporters already predicted for afum

Gave up on the protein localization... too much work for the payoff. Gene annotations / DE genes insufficient

To Do List

  1. Identify membrane proteins in Afum using
    • proteome analyst
    • SignalP
    • LocateP
      Entries
  2. Determine if mem & sec proteins are DE

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