User:Erik Quandt

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Contact Info

Erik Quandt (an artistic interpretation)
  • Erik Quandt
  • UT Austin
  • Laboratory of Dr. Howard Ochman
  • Institute for Cell and Molecular Biology
  • 2500 Speedway, MBB 3.312
  • Austin, TX 78712-1095
  • Email me through OpenWetWare

Education

  • 2014, PhD, University of Texas at Austin
  • 2005, BS Biology, University of Georgia

Research interests

  1. Metagenomics
  2. Genome Engineering
  3. Strain Improvement

Publications

  1. Patrick WM, Quandt EM, Swartzlander DB, and Matsumura I. Multicopy suppression underpins metabolic evolvability. Mol Biol Evol. 2007 Dec;24(12):2716-22. DOI:10.1093/molbev/msm204 | PubMed ID:17884825 | HubMed [Paper1]

    Multicopy suppression underpins metabolic evolvability.

  2. Quandt EM, Hammerling MJ, Summers RM, Otoupal PB, Slater B, Alnahhas RN, Dasgupta A, Bachman JL, Subramanian MV, and Barrick JE. Decaffeination and measurement of caffeine content by addicted Escherichia coli with a refactored N-demethylation operon from Pseudomonas putida CBB5. ACS Synth Biol. 2013 Jun 21;2(6):301-7. DOI:10.1021/sb4000146 | PubMed ID:23654268 | HubMed [Paper2]

    Decaffeination and Measurement of Caffeine Content by Addicted Escherichia coli with a Refactored N-Demethylation Operon from Pseudomonas putida CBB5.

  3. Summers RM, Seffernick JL, Quandt EM, Yu CL, Barrick JE, and Subramanian MV. Caffeine junkie: an unprecedented glutathione S-transferase-dependent oxygenase required for caffeine degradation by Pseudomonas putida CBB5. J Bacteriol. 2013 Sep;195(17):3933-9. DOI:10.1128/JB.00585-13 | PubMed ID:23813729 | HubMed [Paper3]

    Caffeine junkie: an unprecedented glutathione S-transferase-dependent oxygenase required for caffeine degradation by Pseudomonas putida CBB5.

  4. Enyeart PJ, Chirieleison SM, Dao MN, Perutka J, Quandt EM, Yao J, Whitt JT, Keatinge-Clay AT, Lambowitz AM, and Ellington AD. Generalized bacterial genome editing using mobile group II introns and Cre-lox. Mol Syst Biol. 2013;9:685. DOI:10.1038/msb.2013.41 | PubMed ID:24002656 | HubMed [Paper4]

    Generalized bacterial genome editing using mobile group II introns and Cre-lox.

  5. Quandt EM, Deatherage DE, Ellington AD, Georgiou G, and Barrick JE. Recursive genomewide recombination and sequencing reveals a key refinement step in the evolution of a metabolic innovation in Escherichia coli. Proc Natl Acad Sci U S A. 2014 Feb 11;111(6):2217-22. DOI:10.1073/pnas.1314561111 | PubMed ID:24379390 | HubMed [paper5]

    Recursive genomewide recombination and sequencing reveals a key refinement step in the evolution of a metabolic innovation in Escherichia coli.

  6. Chrysostomou C, Quandt EM, Marshall NM, Stone E, and Georgiou G. An alternate pathway of arsenate resistance in E. coli mediated by the glutathione S-transferase GstB. ACS Chem Biol. 2015 Mar 20;10(3):875-82. DOI:10.1021/cb500755j | PubMed ID:25517993 | HubMed [paper6]

    An Alternate Pathway of Arsenate Resistance in E. coli Mediated by the Glutathione S-Transferase GstB.

  7. Quandt EM, Gollihar J, Blount ZD, Ellington AD, Georgiou G, and Barrick JE. Fine-tuning citrate synthase flux potentiates and refines metabolic innovation in the Lenski evolution experiment. Elife. 2015 Oct 14;4. DOI:10.7554/eLife.09696 | PubMed ID:26465114 | HubMed [paper7]

    Fine-tuning citrate synthase flux potentiates and refines metabolic innovation in the Lenski evolution experiment.

  8. ISBN:9780691149776 [Book1]

All Medline abstracts: PubMed | HubMed

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