User:Deepak Chandran

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Contact Info

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Deepak Chandran (an artistic interpretation)

• Deepak Chandran
• Autodesk Research, San Francisco

• deepak.chandran@autodesk.com

Home Page

Tinkercell

Education

• Postdoctoral training at Baylor College of Medicine (Ido Golding's group)
• PhD in Bioengineering, Univ Washington Seattle (Herbert Sauro's group)
• (a few months at Keck Graduate Institute, Claremont, CA)
• 2006, MS in Bioinformatics, Univ. Texas El Paso
• 2004, BS in Computer Science, Univ. Texas Austin

Research projects

• Lambda phage recombineering
• TinkerCell: a software tool that is designed to bring together computational models and wet-lab data, powered by a very easy plug-in framework allowing community to contribute
• Synthetic Biology Open Language: a language for exchanging synthetic biology constructs.
• Identifying design and modeling strategies: using modular modeling to discover design patterns for achieving specific objectives

Research interests

• Education and "crowd" science
• Dynamical systems approach to biology
• Software support for synthetic biology

Works

Tinkercell

TinkerCell paper in J. Biol. Eng

Bistability paper

Mathematical Modeling in Biology review

Links

Sauro Lab