User:Amit Kumar Banerjee

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Amit Kumar Banerjee

• Indian Institute of Chemical Technology
• Tarnaka, Uppal Road,
• Hyderabad, A.P., India
• Email me through OpenWetWare

I work in the Bioinformatics Lab at CSIR-Indian Institute of Chemical Technology, Hyderabad. I learned about OpenWetWare from Friends, and I've joined because I am interested in Bioinformatics, protein folding problem and its simulation and bio datamining.

Education

• 2009-Contd., PhD, CSIR-Indian Institute of Chemical Technology, Hyderabad
• 2007-2008,M.Phil. Biotechnology,Vinayaka Missions University,TamilNadu
• 2007-2008,PG Dip. in Patent Laws,NALSAR,Hyderabad
• 2006, Adv. Course in Bioinformatics,CSIR-Indian Institute of Chemical Technology, JNT University and Center for Development of Advanced Computing(Pune and Hyderabad), Hyderabad
• 2005, Adv. Dip. in Bioinformatics,Software Technology Group,Bangalore
• 2004, M.Sc.,Bangalore University
• 2002, B.Sc., Burdwan Universtiy

Research interests

1. Protein Modeling and Simulation
2. Phylogenetics
3. Bio Data-mining
4. Comparative Genomics
5. Sequence Analysis

Publications

1. Banerjee AK, Ravi V, Murty US, Shanbhag AP, and Prasanna VL. Keratin protein property based classification of mammals and non-mammals using machine learning techniques. Comput Biol Med. 2013 Aug 1;43(7):889-99. DOI:10.1016/j.compbiomed.2013.04.007 |
2. Banerjee AK, Ravi V, Murty US, Sengupta N, and Karuna B. Application of intelligent techniques for classification of bacteria using protein sequence-derived features. Appl Biochem Biotechnol. 2013 Jul;170(6):1263-81. DOI:10.1007/s12010-013-0268-1 |
3. Banerjee AK, Arora N, and Murty U. Analyzing a Potential Drug Target N-Myristoyltransferase of Plasmodium falciparum Through In Silico Approaches. J Glob Infect Dis. 2012 Jan;4(1):43-54. DOI:10.4103/0974-777X.93761 |
4. Banerjee AK, Manasa BP, and Murty US. Assessing the relationship among physicochemical properties of proteins with respect to hydrophobicity: a case study on AGC kinase superfamily. Indian J Biochem Biophys. 2010 Dec;47(6):370-7.
5. Banerjee AK, M S, M N, and Murty US. Classification and clustering analysis of pyruvate dehydrogenase enzyme based on their physicochemical properties. Bioinformation. 2010 Apr 30;4(10):456-62. DOI:10.6026/97320630004456 |
6. Arora N, Banerjee AK, and Murty US. In silico characterization of Shikimate Kinase of Shigella flexneri: a potential drug target. Interdiscip Sci. 2010 Sep;2(3):280-90. DOI:10.1007/s12539-010-0012-2 |
7. Murty US, Banerjee AK, and Arora N. Application of Kohonen maps for solving the classification puzzle in AGC kinase protein sequences. Interdiscip Sci. 2009 Sep;1(3):173-8. DOI:10.1007/s12539-009-0032-1 |
8. Arora N, Banerjee AK, Mutyala S, and Murty US. Comparative characterization of commercially important xylanase enzymes. Bioinformation. 2009 Aug 5;3(10):446-53. DOI:10.6026/97320630003446 |
9. Banerjee AK, Arora N, and Murty US. Structural model of the Plasmodium falciparum thioredoxin reductase:a novel target for antimalarial drugs. J Vector Borne Dis. 2009 Sep;46(3):171-83.
10. Banerjee AK, Kiran K, Murty US, and Venkateswarlu Ch. Classification and identification of mosquito species using artificial neural networks. Comput Biol Chem. 2008 Dec;32(6):442-7. DOI:10.1016/j.compbiolchem.2008.07.020 |
11. Arora N and Banerjee AK. Editorial: looking beyond the obvious: search for novel targets and drugs for reducing the burden of infectious diseases. Mini Rev Med Chem. 2012 Mar;12(3):185-6. DOI:10.2174/1389557511209030185 |
12. Saxena SK, Gupta A, Bhagyashree K, Saxena R, Arora N, Banerjee AK, Tripathi AK, Chandrasekar MJ, Gandhi N, and Nair MP. Targeting strategies for Human immunodeficiency virus: a combinatorial approach. Mini Rev Med Chem. 2012 Mar;12(3):236-54. DOI:10.2174/1389557511209030236 |
13. Arora N and Banerjee AK. New targets, new hope: novel drug targets for curbing malaria. Mini Rev Med Chem. 2012 Mar;12(3):210-26. DOI:10.2174/1389557511209030210 |
14. Arora N and Banerjee AK. Targeting tuberculosis: a glimpse of promising drug targets. Mini Rev Med Chem. 2012 Mar;12(3):187-201. DOI:10.2174/1389557511209030187 |

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15. ISBN:9780470979181
16. ISBN:9788172337278
17. ISBN:9780415665766

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