Talk:20.109(S13):Transcript-level analysis (Day6)
qPCR data
T/R
The Excel file below contains all of the T/R data. Two different CP values are given. The first is calculated when all samples are thresholded at the same level. The second is calculated when a separate threshold is made for each primer set. (T/R Purple, because your samples ran separately, there were not enough of them to make a per RNA threshold reasonable.)
W/F
The Excel file below contains all of the T/R data. Two different CP values are given. The first is calculated when all samples are thresholded at the same level. The second is calculated when a separate threshold is made for each primer set.
qPCR section-wide curves
T/R
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/5/57/S13_M3D5_TR_raw.jpg/400px-S13_M3D5_TR_raw.jpg)
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/0/00/S13_M3D5_TR_noiseband.jpg/400px-S13_M3D5_TR_noiseband.jpg)
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/b/b0/S13_M3D5_TR_18S-melt.jpg/300px-S13_M3D5_TR_18S-melt.jpg)
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/6/60/S13_M3D5_TR_CNII-melt.jpg/300px-S13_M3D5_TR_CNII-melt.jpg)
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/e/e5/S13_M3D5_TR_CNI-melt.jpg/300px-S13_M3D5_TR_CNI-melt.jpg)
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/9/96/S13_M3D5_TR_18S-noiseband.jpg/300px-S13_M3D5_TR_18S-noiseband.jpg)
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/a/ac/S13_M3D5_TR_CNII-noiseband.jpg/300px-S13_M3D5_TR_CNII-noiseband.jpg)
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/c/cf/S13_M3D5_TR_CNI-noiseband.jpg/300px-S13_M3D5_TR_CNI-noiseband.jpg)
W/F
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/7/75/S13_M3D5_WF_raw.jpg/400px-S13_M3D5_WF_raw.jpg)
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/8/86/S13_M3D5_WF_noiseband.jpg/400px-S13_M3D5_WF_noiseband.jpg)
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/7/73/S13_M3D5_WF_18S-melt.jpg/300px-S13_M3D5_WF_18S-melt.jpg)
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/6/66/S13_M3D5_WF_CNII-melt.jpg/300px-S13_M3D5_WF_CNII-melt.jpg)
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/0/03/S13_M3D5_WF_CNI-melt.jpg/300px-S13_M3D5_WF_CNI-melt.jpg)
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/e/ee/S13_M3D5_WF_18S-noiseband.jpg/300px-S13_M3D5_WF_18S-noiseband.jpg)
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/6/6d/S13_M3D5_WF_CNII-noiseband.jpg/300px-S13_M3D5_WF_CNII-noiseband.jpg)
![](https://s3-us-west-2.amazonaws.com/oww-files-thumb/f/f4/S13_M3D5_WF_CNI-noiseband.jpg/300px-S13_M3D5_WF_CNI-noiseband.jpg)
Cross-group meetings
T/R Scheme
Red 1/Yellow 1: Marisol/Dominique
Red 2/Blue 1: Nick/Justin
Orange 1/Platinum 2: Daphne/Katie
Platinum 1/Blue 2: Emily/Noa
Yellow 2/Green 2: Ebaa/Jesse
Green 1/Purple 1:Nikki/Sarah
Orange 2/Purple 2: Stas/Mitali
W/F Scheme
Blue 1/Platinum 2
- Emmanuel/Shanthi
Blue 2/Green 2
- Divya/Steve
Green 1/Platinum 1
- Kevin/Eric
Yellow 1/Orange 2
- Karinna/Katie
Pink 2/Purple 1
- Alice/Zeinab
Purple 2/Orange 1
- Jenny V./Ameila
Yellow 2/Pink 1
- Jenny W./Helen