Strobel:Journal Club

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RNA

July 26, 2012

  • Rob: The anti-Shine–Dalgarno sequence drives translational pausing and codon choice in bacteria. PMID 22456704

Karen: A highly specialized flavin mononucleotide riboswitch responds differently to similar ligands and confers roseoflavin resistance to Streptomyces davawensis http://nar.oxfordjournals.org/content/early/2012/06/26/nar.gks616.abstract?sid=9eb33ea5-62b4-4b61-aba8-6378b5eb424e

June 28, 2012

  • Meg: Determination of ribonuclease sequence-specificity using Pentaprobes and mass spectrometry. PMID 22539524
  • Brian: Ribosomal History Reveals Origins of Modern Protein Synthesis. PMID 22427882

May 31, 2012

  • Katie: Coordinated regulation of accessory genetic elements produces cyclic di-nucleotides for V. cholerae virulence. PMID 22500802
  • Carly: Structural Analysis of the STING Adaptor Protein Reveals a Hydrophobic Dimer Interface and Mode of Cyclic di-GMP Binding. PMID 22579474
  • Dave : A new understanding of the decoding principle on the ribosome. PMID 22437501

April 19, 2012

  • Rob: Riboswitch control of Rho-dependent transcription termination. PMID 22431636
  • Karen: Transcriptional pausing coordinates folding of the aptamer domain and the expression platform of a riboswitch. PMID 22331895

March 22, 2012

  • Brian: Structural Basis for the Rescue of Stalled Ribosomes: Structure of YaeJ Bound to the Ribosome. PMID 22422986
  • Meg: Two Programmed Cell Death Systems in E. Coli: An Apototic-like Death is Inhibited by the mazEF-Mediated Death Pathway PMID 22412352
  • Katie: Allosteric Tertiary Interactions Preorganize the c-di-GMP Riboswitch and Accelerate Ligand Binding PMID 22380737

February 14, 2012

January 12, 2012

 (ASAP article, not on pubmed yet)
  • Jared: PMID 21516113

December 15, 2011

  • Katie:PMID 21906956
  • Brian:PMID 21857664

November 17, 2011

  • Dave: PMID 22006298
  • Carly: PMID 21947006
  • Meg: PMID 21944167

October 19, 2011

  • Rob: PMID 21841796
  • Karen: PMID 20845359

September 22, 2011

  • Katie:PMID 21867910
  • Brian:PMID 21903932

August 25, 2011

  • Carly: PMID 21798953
  • Dave: PMID 21804565
  • Meg: PMID 21788497

July 28, 2011

  • Rob: PMID 21317896
  • Karen: PMID 21732619
  • Brian: PMID 21532598

July 6, 2011

  • Carly: PMID 21532599
  • Katie: PMID 21642531
  • Rob: PMID 21317896

Riboswitches

January 17, 2011

  • Katie: PMID 21151117
  • Carly: PMID 20169626
  • Rob: PMID 17277122
  • Jared: PMID 20230605

October 20, 2010

  • Rob: PMID 20129052 , Preview by Breaker that has better structural depiction - PMID 20129048
  • Carly: PMID 20421948
  • Dave: PMID 20108980
  • Katie: PMID 20158266
  • Ethan: PMID 20886091

September 28, 2010

  • Thanh: PMID 19914169
  • Rob: PMID 20659680
  • Katie: PMID 20508090
  • Carly: PMID 20453864

August 23, 2010

  • Katie: PMID 20705859
  • Carly: PMID 20677780
  • Rob: PMID 20511502
  • Thanh: PMID 20534493

July 19, 2010

  • Katie: Paper- Weeks 2010, Methods - PMID 20597503
  • Dave: PMID 20541014
  • Thanh: PMID 18162543
  • Carly: PMID 20106957
  • Jared: PMID 20439766
  • Rob: PMID 19547922

Biofuels

August 11, 2010

  • Meghan: PMID 20120041
  • Cambria: PMID 20599690
  • Brian: PMID 20639866
  • Jeff: PMID 8962148
  • Dan: PMID 20622067

Ribosome

January 28, 2011

October 28, 2010

October 05, 2010

  • Dave H: PMID 20393556
  • Brian D: PMID 19696352
  • Nicolas C: PMID 20876130

August 04, 2010

  • dave: PMID 20080677
  • Dave K: PMID 20375101
  • Nicolas: PMID 20512119
  • Brian: PMID 20631791