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Wikiomics:BLAST tutorial: Difference between revisions
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blastall -p blastp -d ecoli_aa -i my_nn_fasta_file.fa -o my_nn_fasta_file_vs_ecolidb.blastp_out | blastall -p blastp -d ecoli_aa -i my_nn_fasta_file.fa -o my_nn_fasta_file_vs_ecolidb.blastp_out | ||
</pre> | </pre> | ||
=Non-command line BLAST= | |||
BLAST can be setup to be queried using an internet browser instead of a command line, using NCBI's [[wwwblast]] software. The command line must be used during the setup of wwwblast, but not when running the actual BLAST queries. | |||
=Advanced topics= | =Advanced topics= | ||
