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Pan:Methods: Difference between revisions
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'''DM-tRNA-seq (demethylase tRNA-seq)''' | '''DM-tRNA-seq (demethylase tRNA-seq)''' | ||
''(Demethylase screeing)'' Wang, Y.U., C.D. Katanski, C. Watkins, J.N. Pan, Q. Dai, Z-X. Jiang, Tao Pan*: A High-throughput Screening Method for Evolving a Demethylase Enzyme with Improved and New Functionalities, Nucl. Acids Res., | ''(Demethylase screeing)'' Wang, Y.U., C.D. Katanski, C. Watkins, J.N. Pan, Q. Dai, Z-X. Jiang, Tao Pan*: A High-throughput Screening Method for Evolving a Demethylase Enzyme with Improved and New Functionalities, Nucl. Acids Res., 49, e30 (2021). | ||
''(Microbiome)'' Schwartz, M.H., H.P. Wang, J.N. Pan, W.C. Clark, S. Cui, M.J. Eckwahl, D.W. Pan, M. Parisien, S.M. Owens, B.L. Cheng, K. Martinez, J.B. Xu, E.B. Chang, Tao Pan*, A.M. Eren*: Microbiome characterization by high-throughput transfer RNA sequencing and modification analysis, ''Nature Communications'' 9:5353, p.1-13 (2018). | ''(Microbiome)'' Schwartz, M.H., H.P. Wang, J.N. Pan, W.C. Clark, S. Cui, M.J. Eckwahl, D.W. Pan, M. Parisien, S.M. Owens, B.L. Cheng, K. Martinez, J.B. Xu, E.B. Chang, Tao Pan*, A.M. Eren*: Microbiome characterization by high-throughput transfer RNA sequencing and modification analysis, ''Nature Communications'' 9:5353, p.1-13 (2018). | ||
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'''RNA modification''' | '''RNA modification''' | ||
''(Nanopore pseudouridine)'' Huang, S. W. Zhang, C.D. Katanski, D. Dersh, Q. Dai, K. Lolans, J. Yewdell, A.M. Eren, Tao Pan*: Interferon inducible pseudouridine modification in human mRNA by quantitative nanopore profiling, Genome Biology, in press (2021). | |||
''(Glycosylated queuosine)'' Zhang, W., R-Y. Xu, Z. Matuszek, Z. Cai, Tao Pan*: Detection and quantification of glycosylated queuosine modified tRNAs by acid denaturing and APB gels, RNA 26, 1291-1298 (2020). | ''(Glycosylated queuosine)'' Zhang, W., R-Y. Xu, Z. Matuszek, Z. Cai, Tao Pan*: Detection and quantification of glycosylated queuosine modified tRNAs by acid denaturing and APB gels, RNA 26, 1291-1298 (2020). | ||
