Uploads by Natalie Williams

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Date Name Thumbnail Size Description
23:47, 9 November 2016 NEW Comparison wt runs 20161103.xlsx (file) 25 KB  
20:54, 9 November 2016 NEW Optimization diagnostic(1) 20161102.jpg (file) 59 KB  
20:52, 9 November 2016 NEW wt figures Run2 20161102.zip (file) 731 KB  
20:47, 9 November 2016 16-genes 36-edges NW-wt-fam Sigmoid estimation output(1) 20161102.zip (file) 56 KB  
20:46, 9 November 2016 16-genes 36-edges NW-wt-fam Sigmoid estimation output(1) 20161102.xlsx (file) 72 KB  
21:47, 2 November 2016 NEW BK GRNmap Testing network presentation-all-strains 20161031.pptx (file) 7.73 MB  
01:16, 31 October 2016 NEW weighted wt network-20161030.png (file) 85 KB  
01:13, 31 October 2016 NEW-optimization diagnostic-wt-20161030.jpg (file) 59 KB  
01:12, 31 October 2016 NEW-wt figures 20161030.zip (file) 731 KB  
01:11, 31 October 2016 NEW-16-genes 36-edges NW-wt-fam Sigmoid estimation output-20161030.xlsx (file) 72 KB  
01:10, 31 October 2016 NEW-16-genes 31-edges NW-wt-fam Sigmoid estimation output 20161026.zip (file) 56 KB  
01:09, 31 October 2016 NEW-15-genes 20-edges NW-dCIN5-fam Sigmoid estimation output-20161030.xlsx (file) 64 KB  
01:08, 31 October 2016 NEW-15-genes 20-edges NW-dCIN5-fam Sigmoid estimation output 20161030.xlsx (file) 64 KB  
23:18, 30 October 2016 NEW Weighted dCIN5 network 20161026.png (file) 54 KB  
23:15, 26 October 2016 15-genes 20-edges NW-dCIN5-fam Sigmoid estimation output matlab 20161026.zip (file) 44 KB matlab file of the dCIN5 output
23:13, 26 October 2016 15-genes 20-edges NW-dCIN5-fam Sigmoid estimation output 20161026.xlsx (file) 64 KB Output file for GRNmap run of dCIN5
23:12, 26 October 2016 Optimization diagnostic dCIN5 NW 20161026.jpg (file) 52 KB Diagnostic image with the counts for the run via GRNmap
23:11, 26 October 2016 DCIN5 figures NW 20161026.zip (file) 616 KB All figures from CIN5 network run in GRNmap.
22:45, 26 October 2016 15-genes 20-edges NW-dCIN5-fam Sigmoid estimation 20161026.xlsx (file) 34 KB Newest dCIN5 network with corrected production, degradation, and dCIN5 log expression sheets.
20:32, 26 October 2016 Wt network visualized NW unweighted.png (file) 62 KB The unweighted GRN from the wild-type network.
20:30, 26 October 2016 16-genes 36-edges NW-wt-fam Sigmoid estimation all strains.xlsx (file) 37 KB Excel file for the input sheet. The extension all_strains is given because all the deletion strains are run. The genes that correspond to the deleted gene are within the original, wild-type network.
23:42, 18 November 2015 NW DegRates SpecificTFs.xlsx (file) 27 KB  
00:02, 18 June 2015 20150617 NW TFs TGs.zip (file) 116 KB  
18:53, 17 June 2015 2015.06.15.Targets Regulators pvals.docx (file) 30 KB  
18:53, 17 June 2015 2015.06.15.Classification of Genes.docx (file) 20 KB  
18:51, 17 June 2015 GRNmap Testing June17.pptx (file) 1.22 MB  
16:54, 17 June 2015 20150617 NW Classification.xlsx (file) 16 KB  
16:49, 10 June 2015 Poor Fitting T60 Model to Data Points.pptx (file) 388 KB  
21:36, 9 June 2015 GRNSight wt dCIN5 dZAP1.jpg (file) 76 KB  
21:35, 9 June 2015 GRNSight wt dZAP1 NW.jpg (file) 73 KB  
21:34, 9 June 2015 GRNSight wt dHMO1 NW.jpg (file) 76 KB  
21:34, 9 June 2015 GRNSight wt dGLN3 NW.jpg (file) 71 KB  
21:32, 9 June 2015 GRNSight wt dCIN5 NW.jpg (file) 68 KB  
00:04, 9 June 2015 2015.06.08.AutoReg Investigation NW.docx (file) 32 KB  
17:03, 8 June 2015 NW GRNsight dZAP1.jpg (file) 74 KB  
17:02, 8 June 2015 NW GRNsight dHMO1.jpg (file) 78 KB  
17:01, 8 June 2015 NW GRNsight dGLN3.jpg (file) 74 KB  
17:00, 8 June 2015 NW GRNsight dCIN5.jpg (file) 75 KB  
00:34, 4 June 2015 2015.06.03.Strain Run Comparison Weight Estimation KG NW.docx (file) 16 KB  
18:51, 3 June 2015 KM NW Journal Club CGRNds.pptx (file) 4.64 MB  
17:33, 3 June 2015 2015.06.03.Weighted pos3 neg3 rand.jpg (file) 76 KB  
17:33, 3 June 2015 2015.06.01.Input 21 Gene Network Sigmoid Model wt randomPos3 Neg3 estimation output NW.zip (file) 69 KB  
17:26, 3 June 2015 2015.06.01.Input 21 Gene Network Sigmoid Model wt randomPos Neg Run3 estimation output NW.zip (file) 69 KB  
17:25, 3 June 2015 2015.60.03.Weighted neg pos RanRun3 NW.jpg (file) 75 KB  
17:23, 3 June 2015 2105.06.03 Weighted pos neg RanRun2 NW.jpg (file) 70 KB  
17:18, 3 June 2015 2015.06.03.Weighted pos neg RanRun1 NW.jpg (file) 74 KB  
17:18, 3 June 2015 2015.06.01.Input 21 Gene Network Sigmoid Model allstrain randomPos Neg Run estimation output NW.zip (file) 69 KB  
16:36, 3 June 2015 2015.06.01.Input 21 Gene Network Sigmoid Model wt randomPos Neg Run2 estimation output NW.zip (file) 69 KB  
20:20, 2 June 2015 2015.06.02.Comp all strains 0 pn1 pn3 10 4rand.xlsx (file) 49 KB  
17:39, 2 June 2015 Wt rand neg3 to 3 NW.zip (file) 877 KB  
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