Uploads by Katherine Grace Johnson

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Date Name Thumbnail Size Description
15:47, 27 March 2016 GJ MO GRNmap Spring2015 dHAP4 poster ASBMB draft.pptx (file) 3.49 MB  
15:46, 27 March 2016 GJ-dHAP4-fam strains-added Sigmoid estimation Poster-analysis (1).xlsx (file) 40 KB  
15:45, 27 March 2016 15-genes 28-edges GJ-dHAP4 Rand3.zip (file) 877 KB  
15:44, 27 March 2016 15-genes 28-edges GJ-dHAP4 Rand2.zip (file) 871 KB  
15:44, 27 March 2016 15-genes 28-edges GJ-dHAP4 Rand1.zip (file) 859 KB  
23:25, 10 March 2016 GJ MO GRNmap Spring2015 dHAP4 poster draft3.pptx (file) 5.83 MB  
11:10, 7 March 2016 GJ MO GRNmap Spring2015 dHAP4 poster draft2.pptx (file) 1.96 MB  
14:45, 6 March 2016 GJ MO GRNmap Spring2015 dHAP4 poster draft1.pptx (file) 1.08 MB  
16:46, 26 February 2016 Edited dHAP4 34 gene network deletion added input GJ 11.xlsx (file) 56 KB  
16:40, 26 February 2016 DHAP4 34 gene network deletion added input GJ 11.xlsx (file) 56 KB  
13:18, 23 February 2016 34-genes 102-edges GJ-dHAP4-fam strains-added L-curve parameter-comparison.xlsx (file) 92 KB  
20:37, 15 February 2016 15-genes 28-edges GJ-dHAP4-fam strains-added L-curve parameter-comparison.xlsx (file) 69 KB  
23:30, 7 February 2016 GJ L curves dHAP4 deletion added.xlsx (file) 16 KB updated with new data
16:58, 5 February 2016 Deletion added dHAP4 15 genes plot.pdf (file) 271 KB  
16:57, 5 February 2016 Deletion added dHAP4 34 genes plot.pdf (file) 259 KB  
16:54, 5 February 2016 DHAP4 34 gene network deletion added input GJ.xlsx (file) 53 KB  
16:52, 5 February 2016 DHAP4 15 gene network deletion added input GJ.xlsx (file) 35 KB  
17:15, 29 January 2016 GJ dHAP4 15 gene network deletion added input.xlsx (file) 35 KB Test file for beta code
19:05, 7 November 2015 Wang halflife TF.xlsx (file) 30 KB Excel sheets containing results from Access query and conversion of half life to degradation rate for the roughly 200 transcription factors.
21:28, 8 September 2015 MRNARatesBibliography.docx (file) 8 KB compiled by Natalie Williams and Grace Johnson
14:34, 24 June 2015 GRNmap GRNsight Short.pptx (file) 1.84 MB  
14:32, 24 June 2015 SURP 2015 Final Presentation.pptx (file) 2.32 MB  
17:30, 23 June 2015 Individual gene full analysis.pptx (file) 916 KB full gene analysis looking at validity of inputs
17:55, 22 June 2015 SURP 2015 Presentation draft.pptx (file) 673 KB draft containing summary work analyzing network
11:52, 22 June 2015 All strains w0 alpha 0.001.zip (file) 946 KB figures
11:51, 22 June 2015 GJ Input 21 Gene Network Sigmoid Model all strains w0 alpha0.001 output.zip (file) 73 KB output.mat file
11:51, 22 June 2015 GJ Input 21 Gene Network Sigmoid Model all strains w0 alpha0.001 output.xlsx (file) 90 KB output file
11:50, 22 June 2015 GJ Input 21 Gene Network Sigmoid Model all strains w0 alpha0.001.xlsx (file) 49 KB input file
11:43, 17 June 2015 Wt dCIN5 outputs pvals.pptx (file) 704 KB outputs and p-vals for wt and dcin5
14:53, 16 June 2015 GJ dZAP1 w0 alpha0.001 figures.zip (file) 554 KB figures
14:53, 16 June 2015 GJ Input 21 Gene Network Sigmoid Model dZAP1 w0 alpha0.001 output.zip (file) 30 KB .mat output file
14:52, 16 June 2015 GJ Input 21 Gene Network Sigmoid Model dZAP1 w0 alpha0.001 output.xlsx (file) 62 KB output file
14:52, 16 June 2015 GJ Input 21 Gene Network Sigmoid Model dZAP1 w0 alpha0.001.xlsx (file) 49 KB input file
14:46, 16 June 2015 GJ dHMO1 w0 alpha0.001 figures.zip (file) 539 KB figures
14:45, 16 June 2015 GJ Input 21 Gene Network Sigmoid Model dHMO1 w0 alpha0.001 output.zip (file) 30 KB .mat output file
14:45, 16 June 2015 GJ Input 21 Gene Network Sigmoid Model dHMO1 w0 alpha0.001 output.xlsx (file) 63 KB output file
14:44, 16 June 2015 GJ Input 21 Gene Network Sigmoid Model dHMO1 w0 alpha0.001.xlsx (file) 49 KB input file
14:36, 16 June 2015 GJ dGLN3 w0 alpha0.001 figures.zip (file) 540 KB figures
14:35, 16 June 2015 GJ Input 21 Gene Network Sigmoid Model dGLN3 w0 alpha0.001 output.zip (file) 30 KB .mat output file
14:35, 16 June 2015 GJ Input 21 Gene Network Sigmoid Model dGLN3 w0 alpha0.001 output.xlsx (file) 62 KB output file
14:34, 16 June 2015 GJ Input 21 Gene Network Sigmoid Model dGLN3 w0 alpha0.001.xlsx (file) 49 KB input
12:12, 16 June 2015 GJ dCIN5 w0 alpha0.001 figures.zip (file) 540 KB figures
12:10, 16 June 2015 GJ Input 21 Gene Network Sigmoid Model dCIN5 w0 alpha0.001 output.zip (file) 30 KB .mat output file
12:10, 16 June 2015 GJ Input 21 Gene Network Sigmoid Model dCIN5 w0 alpha0.001 output.xlsx (file) 62 KB output file
12:07, 16 June 2015 GJ Input 21 Gene Network Sigmoid Model dCIN5 w0 alpha0.001.xlsx (file) 49 KB input sheet
16:54, 15 June 2015 B estimation no input genes w0 figures.zip (file) 556 KB images
16:54, 15 June 2015 GJ Input 21 Gene Network Sigmoid Model wt alone w0 alpha0.001 output.zip (file) 31 KB .mat output file
16:53, 15 June 2015 GJ Input 21 Gene Network Sigmoid Model wt alone w0 alpha0.001 output.xlsx (file) 63 KB output file
15:42, 15 June 2015 Code version wt alone estimated params comparison.xlsx (file) 25 KB updated to add comparison of estimated weights
15:31, 15 June 2015 Wt alone w1 network v1.0.10.jpg (file) 84 KB visualized network
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