Software2015

Software made available publicly:

• Shotmap: https://github.com/sharpton/shotmap
• MRC: https://github.com/sharpton/MRC
• SFam Updater: https://github.com/gjospin/Sfam_updater
• Simulations: https://github.com/sriesenfeld/MetaPASSAGE
• Niche Modeling: https://github.com/jladau/SpeciesDistributionModeling/
• MicrobeCensus: https://github.com/snayfach/MicrobeCensus
• TreeOTU: http://figshare.com/articles/TreeOTU/783077
• meta-qc: https://github.com/sharpton/meta-qc

Databases made available publicly:

• SFam: http://edhar.genomecenter.ucdavis.edu/sifting_families/
• VFam: http://derisilab.ucsf.edu/software/vFam/